RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 CALM2P0DP24 149 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 CALM3P0DP25 149 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 ETS2P15036 469 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 PSMC2P35998 433 aaKnown RBP11.7□□□□□ -0.54
CCDC171-202ENST00000432954 DNAJC3Q13217 504 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 PLS1Q14651 629 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 SPECC1LQ69YQ0 1117 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 SND1Q7KZF4 910 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC171-202ENST00000432954 ELMOD1Q8N336 334 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 HSPBAP1Q96EW2 488 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
CCDC171-202ENST00000432954 VPS16Q9H269 839 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 NKX1-2Q9UD57 310 aaPredicted RBP11.7□□□□□ -0.54
CCDC171-202ENST00000432954 SLC12A6Q9UHW9 1150 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 USP20Q9Y2K6 914 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 FGF18O76093 207 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 CHEK2O96017 543 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 S100BP04271 92 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 KRT16P08779 473 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 RARAP10276 462 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 CASP14P31944 242 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 SLC1A1P43005 524 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 BCAP31P51572 246 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 COPAP53621 1224 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 EPHB4P54760 987 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 RPS3AP61247 264 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 TOMM20Q15388 145 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 ODF2Q5BJF6 829 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 VSTM4Q8IW00 320 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 SLC22A8Q8TCC7 542 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 RMDN1Q96DB5 314 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 MRRFQ96E11 262 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 METTL2AQ96IZ6 378 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 PGBD1Q96JS3 809 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 SEPT11Q9NVA2 429 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 AGO2Q9UKV8 859 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 STX8Q9UNK0 236 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 MED14O60244 1454 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 PEX11AO75192 247 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 FOSP01100 380 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 ATF7P17544 494 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 CHRNEQ04844 493 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 SMARCB1Q12824 385 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 UBE3CQ15386 1083 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 METTL2BQ6P1Q9 378 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 FAM122CQ6P4D5 195 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 ASRGL1Q7L266 308 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 KRT28Q7Z3Y7 464 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 FAM9CQ8IZT9 166 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 EHD1Q9H4M9 534 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 MRPL44Q9H9J2 332 aaKnown RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 WASH6PQ9NQA3 447 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 GIN1Q9NXP7 522 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 KCNN3Q9UGI6 736 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 FAF1Q9UNN5 650 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-202ENST00000432954 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
CCDC171-202ENST00000432954 PRSS47A8MTI9 375 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 A8MUI8 341 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ORC4O43929 436 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ARHGEF15O94989 841 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 LYNP07948 512 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 TNFRSF8P28908 595 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 HNF1BP35680 557 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 VHLP40337 213 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 EPS15P42566 896 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 PPP2R2BQ00005 443 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 MTX1Q13505 466 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 KARSQ15046 597 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 TGFBIQ15582 683 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 GALNTL6Q49A17 601 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 TRPM8Q7Z2W7 1104 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 NOP9Q86U38 636 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 RIBC1Q8N443 379 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ARRDC4Q8NCT1 418 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 PYROXD1Q8WU10 500 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 SPACA7Q96KW9 195 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 RAB3IPQ96QF0 476 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 PIH1D1Q9NWS0 290 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 DDX43Q9NXZ2 648 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 AIPL1Q9NZN9 384 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 RPL26L1Q9UNX3 145 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms