RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 XPNPEP1Q9NQW7 623 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 NRBP2Q9NSY0 501 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 CDH22Q9UJ99 828 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 BTBD18B2RXH4 712 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 PER2O15055 1255 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
HDAC4-202ENST00000430200 KRT2P35908 639 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 NEK4P51957 841 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 PSMC5P62195 406 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 CTTNQ14247 550 aaKnown RBP13.22□□□□□ -0.29
HDAC4-202ENST00000430200 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 GJD3Q8N144 294 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 TMEM143Q96AN5 459 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 DYDC2Q96IM9 177 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 NLRP4Q96MN2 994 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 TMEM60Q9H2L4 133 aa13.22□□□□□ -0.29
HDAC4-202ENST00000430200 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
HDAC4-202ENST00000430200 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-202ENST00000430200 VWA8A3KMH1 1905 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 A0A0U1RQF3 1178 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 TMOD1P28289 359 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 QARSP47897 775 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 AFF1P51825 1210 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 KCNC3Q14003 757 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 C8orf34Q49A92 452 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 LRRC43Q8N309 656 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
HDAC4-202ENST00000430200 PIN4Q9Y237 131 aaKnown RBP13.21□□□□□ -0.29
HDAC4-202ENST00000430200 MYH11P35749 1972 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 A0A087WWV3 80 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 POTEMA6NI47 508 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 NT5C1B-RDH14C9J2C7 533 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 PI4K2BG5E9Z4 385 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 TBX3O15119 743 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 LAG3P18627 525 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-202ENST00000430200 PHKA2P46019 1235 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 NDUFV1P49821 464 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 SMAD4Q13485 552 aaKnown RBP13.2□□□□□ -0.3
HDAC4-202ENST00000430200 EMC2Q15006 297 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 DUSP6Q16828 381 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 KCNT2Q6UVM3 1135 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 THNSL1Q8IYQ7 743 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
HDAC4-202ENST00000430200 P4HBP07237 508 aaKnown RBP13.19□□□□□ -0.3
HDAC4-202ENST00000430200 YWHABP31946 246 aaKnown RBP13.19□□□□□ -0.3
HDAC4-202ENST00000430200 EPHA7Q15375 998 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 ODR4Q5SWX8 454 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 C4orf19Q8IY42 314 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
HDAC4-202ENST00000430200 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
HDAC4-202ENST00000430200 CEP170P1Q96L14 293 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-202ENST00000430200 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
HDAC4-202ENST00000430200 MTCL1Q9Y4B5 1905 aaKnown RBP13.19□□□□□ -0.3
HDAC4-202ENST00000430200 SLITRK3O94933 977 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 EYA4O95677 639 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC4-202ENST00000430200 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-202ENST00000430200 POLGP54098 1239 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-202ENST00000430200 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 UBE3AQ05086 875 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 COASYQ13057 564 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 TWF2Q6IBS0 349 aaKnown RBP13.18□□□□□ -0.3
HDAC4-202ENST00000430200 AGMOQ6ZNB7 445 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms