RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ATP13A1Q9HD20 1204 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 ANLNQ9NQW6 1124 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 PDLIM7Q9NR12 457 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 PIM2Q9P1W9 311 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 ACSL6Q9UKU0 697 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 ZBTB21Q9ULJ3 1066 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 PTPN22Q9Y2R2 807 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 GPR45Q9Y5Y3 372 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 UTRNP46939 3433 aa5.12□□□□□ -1.59
HMGB3-203ENST00000430118 RRBP1Q9P2E9 1410 aaKnown RBP5.12□□□□□ -1.59
HMGB3-203ENST00000430118 C1QTNF9BB2RNN3 333 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 SCDO00767 359 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 HGSO14964 777 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 H2AFYO75367 372 aaKnown RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 TADA3O75528 432 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 COL6A2P12110 1019 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 GJA9P57773 515 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 HTRA3P83110 453 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 PDCD1Q15116 288 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 EZH2Q15910 746 aaKnown RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 ATAT1Q5SQI0 421 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 IFIT1BQ5T764 474 aaKnown RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 ESPNLQ6ZVH7 1005 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 CXorf67Q86X51 503 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 STK11IPQ8N1F8 1099 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 MIER2Q8N344 545 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 NETO2Q8NC67 525 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 IL17RAQ96F46 866 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 TAAR9Q96RI9 348 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 RNF38Q9H0F5 515 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 DNAJC28Q9NX36 388 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 BTG4Q9NY30 223 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 MSRAQ9UJ68 235 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 ASB1Q9Y576 335 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 SPATA31A3Q5VYP0 1347 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 FRMPD2Q68DX3 1309 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-203ENST00000430118 RREB1Q92766 1687 aa5.11□□□□□ -1.59
HMGB3-203ENST00000430118 RBAK-RBAKDNI3L0D1 243 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 FOXP2O15409 715 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 BUB1BO60566 1050 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 DTNBO60941 627 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 C4BPAP04003 597 aaKnown RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 FUCA1P04066 466 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 PTPN1P18031 435 aaKnown RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 FSTP19883 344 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 PTX3P26022 381 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 MANFP55145 182 aaKnown RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 RTP1P59025 263 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 ZNF280AP59817 542 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 COL14A1Q05707 1796 aaKnown RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 GRM3Q14832 879 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 ZRSR2Q15696 482 aaKnown RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 CLUL1Q15846 466 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 HSF5Q4G112 596 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 XP32Q5T750 250 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 CPZQ66K79 652 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 FSTL4Q6MZW2 842 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 KCNK18Q7Z418 384 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 CATIPQ7Z7H3 387 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 SPPL2CQ8IUH8 684 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 C7orf31Q8N865 590 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 JADE3Q92613 823 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 STRBPQ96SI9 672 aaKnown RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 FAM204AQ9H8W3 233 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 LRRC4CQ9HCJ2 640 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 BSDC1Q9NW68 430 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-203ENST00000430118 ASH2LQ9UBL3 628 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 TAF6LQ9Y6J9 622 aa5.1□□□□□ -1.59
HMGB3-203ENST00000430118 NUP188Q5SRE5 1749 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 NRAPQ86VF7 1730 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 ABCA3Q99758 1704 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 THSD7AQ9UPZ6 1657 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 NRKQ7Z2Y5 1582 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 DLC1Q96QB1 1528 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 NAIPQ13075 1403 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 SBNO1A3KN83 1393 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 A0A1W2PQ27 194 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 A0A1W2PQ64 194 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 A0A1W2PQC6 194 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 A0A1W2PQD8 194 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 NRDCO43847 1150 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 PPP1R11O60927 126 aaPredicted RBP5.09□□□□□ -1.59
HMGB3-203ENST00000430118 ZBED1O96006 694 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 POU2F2P09086 479 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 FURINP09958 794 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 ZGLP1P0C6A0 271 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 SLC16A1P53985 500 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 DHX8Q14562 1220 aaKnown RBP5.09□□□□□ -1.59
HMGB3-203ENST00000430118 TMEM132BQ14DG7 1078 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 ACAP2Q15057 778 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 NR0B2Q15466 257 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB3-203ENST00000430118 CATSPEREQ5SY80 951 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 ERICH6BQ5W0A0 696 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 TIGD7Q6NT04 549 aaPredicted RBP5.09□□□□□ -1.59
HMGB3-203ENST00000430118 ZDHHC13Q8IUH4 622 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 HPS3Q969F9 1004 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 TIFAQ96CG3 184 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 AP5M1Q9H0R1 490 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms