RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PLXNA4	Q9HCM2	1894 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	CCNT1	O60563	726 aa	Known RBP	19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	GLP2R	O95838	553 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	DARS	P14868	501 aa	Known RBP	19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	PSMC5	P62195	406 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	UBE3A	Q05086	875 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	ST3GAL1	Q11201	340 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	NR5A1	Q13285	461 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	MTERF2	Q49AM1	385 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	ANO5	Q75V66	913 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	SUGP1	Q8IWZ8	645 aa	Known RBP	19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	MICAL1	Q8TDZ2	1067 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	PHOX2B	Q99453	314 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	NAP1L4	Q99733	375 aa	Known RBP	19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	TMEM161A	Q9NX61	479 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	BARX2	Q9UMQ3	279 aa	Predicted RBP	19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	PCDHB12	Q9Y5F1	795 aa		19.91	■□□□□ 0.78
MRPL28-203	ENST00000429738	FAM205C	A6NFA0	338 aa		19.9	■□□□□ 0.78
MRPL28-203	ENST00000429738	CENPB	P07199	599 aa	Predicted RBP	19.9	■□□□□ 0.78
MRPL28-203	ENST00000429738	KRT2	P35908	639 aa		19.9	■□□□□ 0.78
MRPL28-203	ENST00000429738	FAM102B	Q5T8I3	360 aa		19.9	■□□□□ 0.78
MRPL28-203	ENST00000429738	SH2D3A	Q9BRG2	576 aa		19.9	■□□□□ 0.78
MRPL28-203	ENST00000429738	PCDHGC5	Q9Y5F6	944 aa		19.9	■□□□□ 0.78
MRPL28-203	ENST00000429738	JAK2	O60674	1132 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	MAF	O75444	373 aa	Predicted RBP	19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	ATF7	P17544	494 aa	Predicted RBP	19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	QARS	P47897	775 aa	Known RBP	19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	CDC42EP1	Q00587	391 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	SPIRE1	Q08AE8	756 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	POTED	Q86YR6	584 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	FBXL6	Q8N531	539 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZNF668	Q96K58	619 aa	Predicted RBP	19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	RPGRIP1	Q96KN7	1286 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	AAAS	Q9NRG9	546 aa		19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	WRAP73	Q9P2S5	460 aa	Predicted RBP	19.89	■□□□□ 0.77
MRPL28-203	ENST00000429738	PER2	O15055	1255 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	SIGLEC14	Q08ET2	396 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	TCF15	Q12870	199 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	SPOUT1	Q5T280	376 aa	Known RBP	19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	SUSD6	Q92537	303 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	CDCA3	Q99618	268 aa	Predicted RBP	19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	ATP6V0A4	Q9HBG4	840 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	BRMS1	Q9HCU9	246 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	TLR9	Q9NR96	1032 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	RNF19A	Q9NV58	838 aa		19.88	■□□□□ 0.77
MRPL28-203	ENST00000429738	FSD2	A1L4K1	749 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	TBKBP1	A7MCY6	615 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	DDX11L8	A8MPP1	907 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	DKC1	O60832	514 aa	Known RBP eCLIP	19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	P4HB	P07237	508 aa	Known RBP	19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	FGFR1	P11362	822 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZSCAN20	P17040	1043 aa	Predicted RBP	19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	IBSP	P21815	317 aa	Predicted RBP	19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	EPHA7	Q15375	998 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	PLA2G4F	Q68DD2	849 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	PDE12	Q6L8Q7	609 aa	Known RBP	19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	C4orf19	Q8IY42	314 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	NLRP7	Q8WX94	980 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	CWH43	Q9H720	699 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	CYP26B1	Q9NR63	512 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	PPME1	Q9Y570	386 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	ARID2	Q68CP9	1835 aa		19.87	■□□□□ 0.77
MRPL28-203	ENST00000429738	PTPRZ1	P23471	2315 aa	Predicted RBP	19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	BTBD18	B2RXH4	712 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	FGF18	O76093	207 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	ERVFC1	P60507	584 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	DUSP6	Q16828	381 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZNF410	Q86VK4	478 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	ECHDC2	Q86YB7	292 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	SLFN12	Q8IYM2	578 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	VN1R2	Q8NFZ6	395 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	CASD1	Q96PB1	797 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	JPH2	Q9BR39	696 aa	Predicted RBP	19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	GCOM2	Q9BZD3	368 aa	Predicted RBP	19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	TMEM117	Q9H0C3	514 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	TYW1	Q9NV66	732 aa	Known RBP	19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	HCST	Q9UBK5	93 aa		19.86	■□□□□ 0.77
MRPL28-203	ENST00000429738	USP34	Q70CQ2	3546 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738		A0A087WZ62	844 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738		A0A0U1RQF3	1178 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	WNT7A	O00755	349 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	ST18	O60284	1047 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	CSDE1	O75534	798 aa	Known RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	FGFR4	P22455	802 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	DNM2	P50570	870 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	NPEPPS	P55786	919 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	RBM10	P98175	930 aa	Known RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	TMEM184A	Q6ZMB5	413 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZNF598	Q86UK7	904 aa	Known RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	DIS3L2	Q8IYB7	885 aa	Known RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZNF579	Q8NAF0	562 aa	Known RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	SCLT1	Q96NL6	688 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	FDXACB1	Q9BRP7	624 aa	Predicted RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	LXN	Q9BS40	222 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	TRAIP	Q9BWF2	469 aa		19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	DHX33	Q9H6R0	707 aa	Known RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	SUCLA2	Q9P2R7	463 aa	Predicted RBP	19.85	■□□□□ 0.77
MRPL28-203	ENST00000429738	FSCN2	O14926	492 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	HOXA2	O43364	376 aa		19.84	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms