RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ECE2O60344 883 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 CTNND1O60716 968 aaKnown RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 NDUFB10O96000 172 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 SHMT1P34896 483 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 GMPSP49915 693 aaPredicted RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 ERVK-9P63128 1117 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 CERS5Q8N5B7 392 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 WHAMMQ8TF30 809 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 NAP1L4Q99733 375 aaKnown RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 ZNF577Q9BSK1 485 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.72□□□□□ -1.015e-8■■■■■ 32.9
HPS4-205ENST00000429411 PARVGQ9HBI0 331 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 METTL14Q9HCE5 456 aaKnown RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 SWAP70Q9UH65 585 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 ASIC3Q9UHC3 531 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 FZD1Q9UP38 647 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 USTQ9Y2C2 406 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 DAAM1Q9Y4D1 1078 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 ESYT2A0FGR8 921 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 ZNF233A6NK53 670 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 FAM86B1E9PN63 330 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 hCG_1984214I3L0E3 225 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 PPP1R37O75864 691 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 STK10O94804 968 aaKnown RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 NOL4O94818 638 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 FAM86B2P0C5J1 330 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 HSD17B3P37058 310 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 CDK17Q00537 523 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 GIT2Q14161 759 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 TNIP1Q15025 636 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 WDR78Q5VTH9 848 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 DENND2CQ68D51 928 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 AADACL2Q6P093 401 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 SYCE1Q8N0S2 351 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 ZNF713Q8N859 430 aaPredicted RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 SLC35G2Q8TBE7 412 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 CCT8L2Q96SF2 557 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 FMO2Q99518 471 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 JPH2Q9BR39 696 aaPredicted RBP8.72□□□□□ -1.01
HPS4-205ENST00000429411 PI4KBQ9UBF8 816 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 NHSQ6T4R5 1651 aa8.72□□□□□ -1.01
HPS4-205ENST00000429411 TISP43B9A030 160 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 RGS16O15492 202 aaPredicted RBP8.71□□□□□ -1.01
HPS4-205ENST00000429411 CCDC172P0C7W6 258 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 FERP16591 822 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 ECE1P42892 770 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.01
HPS4-205ENST00000429411 ZKSCAN8Q15776 578 aaPredicted RBP8.71□□□□□ -1.01
HPS4-205ENST00000429411 SEL1L2Q5TEA6 688 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 PPP4R3AQ6IN85 833 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 NLRP14Q86W24 1093 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 CCDC17Q96LX7 622 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 COA1Q9GZY4 146 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 RNF14Q9UBS8 474 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 RASAL2Q9UJF2 1139 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 ZNF541Q9H0D2 1346 aa8.71□□□□□ -1.01
HPS4-205ENST00000429411 EML1O00423 815 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 MSH4O15457 936 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 ALAS1P13196 640 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 KCNJ1P48048 391 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 PRELPP51888 382 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 DR1Q01658 176 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 TMEM119Q4V9L6 283 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 GLE1Q53GS7 698 aaKnown RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 MEI1Q5TIA1 1274 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 ICE2Q659A1 982 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 MICALL2Q8IY33 904 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 ZNF473Q8WTR7 871 aaKnown RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 THOC1Q96FV9 657 aaKnown RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.71□□□□□ -1.021e-9■■□□□ 14.2
HPS4-205ENST00000429411 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 ACP6Q9NPH0 428 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 TYW1Q9NV66 732 aaKnown RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 TBK1Q9UHD2 729 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 BAIAP2L1Q9UHR4 511 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 CNOT7Q9UIV1 285 aaKnown RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 ACSL3O95573 720 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 FLT3P36888 993 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 LRRC14Q15048 493 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 C2CD6Q53TS8 623 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 FAM102BQ5T8I3 360 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 CACNA2D3Q8IZS8 1091 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 GIMAP7Q8NHV1 300 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 PBKQ96KB5 322 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 BTBD6Q96KE9 485 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 FAM118BQ9BPY3 351 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 BZW2Q9Y6E2 419 aaKnown RBP8.71□□□□□ -1.02
HPS4-205ENST00000429411 ABCB11O95342 1321 aa8.71□□□□□ -1.02
HPS4-205ENST00000429411 POLR2MP0CAP2 368 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 FGFR4P22455 802 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 MDH1P40925 334 aaKnown RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 CALCOCO2Q13137 446 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 ARSHQ5FYA8 562 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 MIER3Q7Z3K6 550 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 FAM212AQ96EL1 285 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 THAP2Q9H0W7 228 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms