RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 SKIP12755 728 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 XRCC6P12956 609 aaKnown RBP eCLIP12.84□□□□□ -0.35
RCC1-208ENST00000429051 GJB2P29033 226 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 FAM189BP81408 668 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
RCC1-208ENST00000429051 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
RCC1-208ENST00000429051 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 ABI1Q8IZP0 508 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
RCC1-208ENST00000429051 PRPF31Q8WWY3 499 aaKnown RBP12.84□□□□□ -0.35
RCC1-208ENST00000429051 RSPH1Q8WYR4 309 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 P2RX5Q93086 422 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 HLA-CQ95604 372 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
RCC1-208ENST00000429051 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
RCC1-208ENST00000429051 A0A0U1RQF3 1178 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 TBKBP1A7MCY6 615 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 LAD1O00515 517 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
RCC1-208ENST00000429051 EOMESO95936 686 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 MUTP22033 750 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 PHKA2P46019 1235 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 LAMTOR4Q0VGL1 99 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 TFDP1Q14186 410 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 PCBP1Q15365 356 aaKnown RBP eCLIP12.83□□□□□ -0.36
RCC1-208ENST00000429051 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 RILPL1Q5EBL4 403 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
RCC1-208ENST00000429051 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 SRGAP1Q7Z6B7 1085 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 ECHDC2Q86YB7 292 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 KSR1Q8IVT5 923 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 NACC1Q96RE7 527 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.36
RCC1-208ENST00000429051 TMEM117Q9H0C3 514 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
RCC1-208ENST00000429051 PIN4Q9Y237 131 aaKnown RBP12.83□□□□□ -0.36
RCC1-208ENST00000429051 PCDHB12Q9Y5F1 795 aa12.83□□□□□ -0.36
RCC1-208ENST00000429051 ZBTB39O15060 712 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
RCC1-208ENST00000429051 SRGAP2CP0DJJ0 459 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 FGFR4P22455 802 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 RPA1P27694 616 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 RARRES1P49788 294 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
RCC1-208ENST00000429051 RAB27AP51159 221 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 NCBP1Q09161 790 aaKnown RBP12.82□□□□□ -0.36
RCC1-208ENST00000429051 FAM102BQ5T8I3 360 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 FERMT3Q86UX7 667 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 CATSPER3Q86XQ3 398 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 PIGOQ8TEQ8 1089 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 TRAIPQ9BWF2 469 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
RCC1-208ENST00000429051 NSUN3Q9H649 340 aaKnown RBP12.82□□□□□ -0.36
RCC1-208ENST00000429051 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
RCC1-208ENST00000429051 DBR1Q9UK59 544 aaKnown RBP12.82□□□□□ -0.36
RCC1-208ENST00000429051 VCANP13611 3396 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 ERLIN2O94905 339 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 FGFR1P11362 822 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 LAG3P18627 525 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 PRPHP41219 470 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 GATMP50440 423 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 PTGDRQ13258 359 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 PDIA5Q14554 519 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 LARP1BQ659C4 914 aaKnown RBP12.81□□□□□ -0.36
RCC1-208ENST00000429051 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 PPP2R3CQ969Q6 453 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 MRPL9Q9BYD2 267 aaKnown RBP12.81□□□□□ -0.36
RCC1-208ENST00000429051 AGPAT5Q9NUQ2 364 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 LRWD1Q9UFC0 647 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 PCDHB6Q9Y5E3 794 aa12.81□□□□□ -0.36
RCC1-208ENST00000429051 ARHGEF35A5YM69 484 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 CARNS1A5YM72 827 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 GRM6O15303 877 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 NCK2O43639 380 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 USO1O60763 962 aaKnown RBP12.8□□□□□ -0.36
RCC1-208ENST00000429051 MED24O75448 989 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 PDCP20941 246 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
RCC1-208ENST00000429051 CCT6AP40227 531 aaKnown RBP12.8□□□□□ -0.36
RCC1-208ENST00000429051 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
RCC1-208ENST00000429051 UBE3AQ05086 875 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 NBR1Q14596 966 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 DTHD1Q6ZMT9 781 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 KLHL23Q8NBE8 558 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 PGBD4Q96DM1 585 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 CASD1Q96PB1 797 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 ALG13Q9NP73 1137 aaKnown RBP12.8□□□□□ -0.36
RCC1-208ENST00000429051 XPNPEP1Q9NQW7 623 aa12.8□□□□□ -0.36
RCC1-208ENST00000429051 FAM105AQ9NUU6 356 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms