RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 CKAP2LQ8IYA6 745 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 MAML2Q8IZL2 1156 aaPredicted RBP13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 LPPQ93052 612 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 KLHL5Q96PQ7 755 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 VN1R3Q9BXE9 311 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 IRAK3Q9Y616 596 aa13.21□□□□□ -0.29
ALMS1P1-201ENST00000428767 CLUHO75153 1309 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 ATG7O95352 703 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 SDHBP21912 280 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 KIF5BP33176 963 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 CLCN4P51793 760 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 PHLDB3Q6NSJ2 640 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 DCLRE1AQ6PJP8 1040 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 ABHD15Q6UXT9 468 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 LRRC71Q8N4P6 559 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 EMILIN2Q9BXX0 1053 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 IL25Q9H293 177 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 AGO4Q9HCK5 861 aaKnown RBP13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 ZNF302Q9NR11 478 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 SMG5Q9UPR3 1016 aaKnown RBP13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 INPP5FQ9Y2H2 1132 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
ALMS1P1-201ENST00000428767 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 A0A0U1RQF3 1178 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 SPTLC1O15269 473 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 ADRB1P08588 477 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 CNPP09543 421 aaKnown RBP13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 ATP4AP20648 1035 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 SWSAP1Q6NVH7 229 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 RTKNQ9BST9 563 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 NRDE2Q9H7Z3 1164 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 TBC1D13Q9NVG8 400 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 SPATA6Q9NWH7 488 aaPredicted RBP13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
ALMS1P1-201ENST00000428767 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 C2CD2LO14523 706 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 INPPL1O15357 1258 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 LAMTOR5O43504 91 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 B4GALT3O60512 393 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 RFPL2O75678 378 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 GALTP07902 379 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 SLC11A1P49279 550 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 LMNB2Q03252 620 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 CSTF1Q05048 431 aaKnown RBP13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 AAMPQ13685 434 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 GET4Q7L5D6 327 aaPredicted RBP13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 STAMQ92783 540 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
ALMS1P1-201ENST00000428767 MEIS3P2A8K0S8 358 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 RXRAP19793 462 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 KCNA4P22459 653 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 COL9A2Q14055 689 aaPredicted RBP13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 PPM1JQ5JR12 505 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 EFCAB12Q6NXP0 572 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 CCDC82Q8N4S0 544 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 ATRIPQ8WXE1 791 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
ALMS1P1-201ENST00000428767 HIP1O00291 1037 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 GPC3P51654 580 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 AK2P54819 239 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 ANTXR2P58335 489 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 HTR4Q13639 388 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 UBXN2BQ14CS0 331 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 GLB1LQ6UWU2 654 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
ALMS1P1-201ENST00000428767 PARD6AQ9NPB6 346 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms