RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 CAMK1Q14012 370 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 MYSM1Q5VVJ2 828 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 USP17L6PQ6QN14 398 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 VSIG10LQ86VR7 867 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 FCHSD1Q86WN1 690 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 DHX37Q8IY37 1157 aaKnown RBP9.77□□□□□ -0.85
HDAC1-202ENST00000428704 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 LINC00301Q8NCQ3 95 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 SUSD6Q92537 303 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 RUBCNQ92622 972 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 GPKOWQ92917 476 aaPredicted RBP eCLIP9.77□□□□□ -0.85
HDAC1-202ENST00000428704 TRIM44Q96DX7 344 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-202ENST00000428704 KATNAL1Q9BW62 490 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.85
HDAC1-202ENST00000428704 PLVAPQ9BX97 442 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 CLSTN2Q9H4D0 955 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 SEC63Q9UGP8 760 aaKnown RBP9.77□□□□□ -0.85
HDAC1-202ENST00000428704 DDX41Q9UJV9 622 aaKnown RBP9.77□□□□□ -0.85
HDAC1-202ENST00000428704 PLAGL2Q9UPG8 496 aa9.77□□□□□ -0.85
HDAC1-202ENST00000428704 CEP250Q9BV73 2442 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 GH1P01241 217 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 MYCLP12524 364 aaPredicted RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 DNAJB1P25685 340 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 SP2Q02086 613 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 SSRP1Q08945 709 aaKnown RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 SEMA3FQ13275 785 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 BTG3Q14201 252 aaPredicted RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 RTN1Q16799 776 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 KIAA0753Q2KHM9 967 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 WWC2Q6AWC2 1192 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 PARP9Q8IXQ6 854 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 CCDC105Q8IYK2 499 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 ENGASEQ8NFI3 743 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 CLP1Q92989 425 aaKnown RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 SMOC2Q9H3U7 446 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 RBM28Q9NW13 759 aaKnown RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 DACT1Q9NYF0 836 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 NR2E1Q9Y466 385 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 MRVI1Q9Y6F6 885 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 MORC2Q9Y6X9 1032 aaPredicted RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 R4GN57 208 aa9.76□□□□□ -0.85
HDAC1-202ENST00000428704 MAP1BP46821 2468 aaKnown RBP9.76□□□□□ -0.85
HDAC1-202ENST00000428704 PPP6R2O75170 966 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 DEXIO95424 95 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 HOXD8P13378 290 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 SDHBP21912 280 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 CCND2P30279 289 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 SLC39A14Q15043 492 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 DGKDQ16760 1214 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 UBE2SQ16763 222 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 CWF19L1Q69YN2 538 aaKnown RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 HEATR3Q7Z4Q2 680 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 DCLK2Q8N568 766 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 DTWD2Q8NBA8 298 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 POF1BQ8WVV4 589 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 P2RX5Q93086 422 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 INPP4AQ96PE3 977 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 RNF26Q9BY78 433 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 TNMDQ9H2S6 317 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 BCAS3Q9H6U6 928 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 TLE6Q9H808 572 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 USP24Q9UPU5 2620 aa9.75□□□□□ -0.85
HDAC1-202ENST00000428704 TRIP12Q14669 1992 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-202ENST00000428704 SPTBN2O15020 2390 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 ANKRD11Q6UB99 2663 aaPredicted RBP9.74□□□□□ -0.85
HDAC1-202ENST00000428704 FRYLO94915 3013 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 MICAL3Q7RTP6 2002 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 FAM237AA0A1B0GTK4 181 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 ESPNB1AK53 854 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 PER2O15055 1255 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 PRPF3O43395 683 aaKnown RBP9.74□□□□□ -0.85
HDAC1-202ENST00000428704 NR1I2O75469 434 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 ITGB1P05556 798 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 CTSHP09668 335 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 ZNF286BP0CG31 522 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 SRGAP2BP0DMP2 458 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 AOC1P19801 751 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 FAM160A1Q05DH4 1040 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 SNW1Q13573 536 aaKnown RBP9.74□□□□□ -0.85
HDAC1-202ENST00000428704 TRIM29Q14134 588 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 HSDL1Q3SXM5 330 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 NAALADL2Q58DX5 795 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 PCNX4Q63HM2 1172 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 TRIM22Q8IYM9 498 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 PPTC7Q8NI37 304 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 SPPL3Q8TCT6 385 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 BICD2Q8TD16 824 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 MICAL1Q8TDZ2 1067 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 APBB2Q92870 758 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 FOXP1Q9H334 677 aaPredicted RBP9.74□□□□□ -0.85
HDAC1-202ENST00000428704 PSTPIP2Q9H939 334 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 PCDHA7Q9UN72 937 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 TELO2Q9Y4R8 837 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 MYH15Q9Y2K3 1946 aa9.74□□□□□ -0.85
HDAC1-202ENST00000428704 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms