RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SPATA2LQ8IUW3 424 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-206ENST00000428680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.83□□□□□ -1.16
CNOT4-206ENST00000428680 SECISBP2LQ93073 1101 aaKnown RBP7.83□□□□□ -1.16
CNOT4-206ENST00000428680 MTG1Q9BT17 334 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-206ENST00000428680 ARHGAP39Q9C0H5 1083 aa7.83□□□□□ -1.16
CNOT4-206ENST00000428680 PCIF1Q9H4Z3 704 aa7.83□□□□□ -1.16
CNOT4-206ENST00000428680 SUCLA2Q9P2R7 463 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-206ENST00000428680 P4HBP07237 508 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 DNAJB2P25686 324 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 TRAPPC10P48553 1259 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 PPIGQ13427 754 aaKnown RBP eCLIP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 KCNB1Q14721 858 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 MGAT5BQ3V5L5 792 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 CCDC25Q86WR0 208 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 LARP4BQ92615 738 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 SKA1Q96BD8 255 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 SEPT5Q99719 369 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 MRPL4Q9BYD3 311 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 TMX1Q9H3N1 280 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ZMYND8Q9ULU4 1186 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 Q9Y3F1 56 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 CACNA1GO43497 2377 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 IKBKBO14920 756 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 GMNNO75496 209 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 APOEP02649 317 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 HSPA4P34932 840 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ALCAMQ13740 583 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 E2F5Q15329 346 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 MAP7D1Q3KQU3 841 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 EPHA10Q5JZY3 1008 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 TTC23LQ6PF05 361 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 AOPEPQ8N6M6 819 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 STKLD1Q8NE28 680 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 NEK9Q8TD19 979 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 KIF12Q96FN5 646 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 BLZF1Q9H2G9 400 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 CPVLQ9H3G5 476 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 SLC38A7Q9NVC3 462 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 FLT1P17948 1338 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 HBP1O60381 514 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ZC3H11AO75152 810 aaKnown RBP eCLIP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 DDIT3P35638 169 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 SMAD3P84022 425 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ITIH3Q06033 890 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 PRPSAP1Q14558 356 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 PTPAQ15257 358 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 UAP1Q16222 522 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 GPR161Q8N6U8 529 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 CCNYQ8ND76 341 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 MRPS31Q92665 395 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 RNPC3Q96LT9 517 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 NAP1L3Q99457 506 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ABHD16BQ9H3Z7 469 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 GOLGA8SH3BPF8 625 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 THAP12O43422 761 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 PLA2G6O60733 806 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 IFNB1P01574 187 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 PRKAR2AP13861 404 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 KLRC2P26717 231 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 EFNA5P52803 228 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 XKR3Q5GH77 459 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 RWDD4Q6NW29 188 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 DCP1BQ8IZD4 617 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 NSUN4Q96CB9 384 aaKnown RBP7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ASIC4Q96FT7 647 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 FAM81BQ96LP2 452 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 FAM20AQ96MK3 541 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 ACAP3Q96P50 834 aa7.82□□□□□ -1.16
CNOT4-206ENST00000428680 SYNGAP1Q96PV0 1343 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 OTOFQ9HC10 1997 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 LONP1P36776 959 aaKnown RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 KPNA1P52294 538 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 MFAP3P55082 362 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 KYAT1Q16773 422 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 PSRC1Q6PGN9 363 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 CEP68Q76N32 757 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 FAM43AQ8N2R8 423 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 APPL2Q8NEU8 664 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 PDCD6IPQ8WUM4 868 aaKnown RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 SPATC1LQ9H0A9 340 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 NUCKS1Q9H1E3 243 aaKnown RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 MAP10Q9P2G4 905 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 MTRF1LQ9UGC7 380 aaKnown RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 STXBP5LQ9Y2K9 1186 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 ARIH1Q9Y4X5 557 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 FLT3LGP49771 235 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 CEP55Q53EZ4 464 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 CFAP157Q5JU67 520 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 ZNF697Q5TEC3 545 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 ATG9AQ7Z3C6 839 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 MAATS1Q7Z4T9 603 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 BANK1Q8NDB2 785 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 SNX19Q92543 992 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 ACSF2Q96CM8 615 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-206ENST00000428680 AK8Q96MA6 479 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 NLRC4Q9NPP4 1024 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 SYT1P21579 422 aa7.81□□□□□ -1.16
CNOT4-206ENST00000428680 PDIA3P30101 505 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms