RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TMEM173Q86WV6 379 aaPredicted RBP18.65■□□□□ 0.58
VARS-216ENST00000428445 FBXL6Q8N531 539 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 C12orf76Q8N812 135 aaPredicted RBP18.65■□□□□ 0.58
VARS-216ENST00000428445 MRPL43Q8N983 215 aaKnown RBP18.65■□□□□ 0.58
VARS-216ENST00000428445 BICD2Q8TD16 824 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 AIFM3Q96NN9 605 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 FDXACB1Q9BRP7 624 aaPredicted RBP18.65■□□□□ 0.58
VARS-216ENST00000428445 RNF26Q9BY78 433 aaPredicted RBP18.65■□□□□ 0.58
VARS-216ENST00000428445 AGXT2Q9BYV1 514 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 SMOC2Q9H3U7 446 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 NGRNQ9NPE2 291 aaKnown RBP18.65■□□□□ 0.58
VARS-216ENST00000428445 FAM86C1Q9NVL1 165 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 HCFC2Q9Y5Z7 792 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 ZDBF2Q9HCK1 2354 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 CLASP2O75122 1294 aaKnown RBP18.64■□□□□ 0.57
VARS-216ENST00000428445 PSMD10O75832 226 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 CXCL14O95715 111 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 USP11P51784 963 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 SIGLEC14Q08ET2 396 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 PTPN21Q16825 1174 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 SUGP1Q8IWZ8 645 aaKnown RBP18.64■□□□□ 0.57
VARS-216ENST00000428445 RIT2Q99578 217 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 POMKQ9H5K3 350 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 USP34Q70CQ2 3546 aa18.64■□□□□ 0.57
VARS-216ENST00000428445 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
VARS-216ENST00000428445 JAK3P52333 1124 aa18.63■□□□□ 0.57
VARS-216ENST00000428445 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
VARS-216ENST00000428445 SMC1AQ14683 1233 aaKnown RBP18.63■□□□□ 0.57
VARS-216ENST00000428445 ZBTB33Q86T24 672 aa18.63■□□□□ 0.57
VARS-216ENST00000428445 CCDC148Q8NFR7 591 aa18.63■□□□□ 0.57
VARS-216ENST00000428445 C2CD4DB7Z1M9 353 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 ZC3H11AO75152 810 aaKnown RBP eCLIP18.62■□□□□ 0.57
VARS-216ENST00000428445 EOMESO95936 686 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 SRGAP2BP0DMP2 458 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 SFNP31947 248 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 PPM1AP35813 382 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 Q4G0T1 1027 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 PLA2G4FQ68DD2 849 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 RHPN2Q8IUC4 686 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 VPS52Q8N1B4 723 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 FBXL16Q8N461 479 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 ZNF579Q8NAF0 562 aaKnown RBP18.62■□□□□ 0.57
VARS-216ENST00000428445 BCL7CQ8WUZ0 217 aaPredicted RBP18.62■□□□□ 0.57
VARS-216ENST00000428445 NIFKQ9BYG3 293 aaKnown RBP18.62■□□□□ 0.57
VARS-216ENST00000428445 GCOM2Q9BZD3 368 aaPredicted RBP18.62■□□□□ 0.57
VARS-216ENST00000428445 SUCLA2Q9P2R7 463 aaPredicted RBP18.62■□□□□ 0.57
VARS-216ENST00000428445 PCDHA4Q9UN74 947 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 INPP5FQ9Y2H2 1132 aa18.62■□□□□ 0.57
VARS-216ENST00000428445 EML1O00423 815 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 B4GALT3O60512 393 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 AVPR2P30518 371 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 PHKA2P46019 1235 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 ALDH7A1P49419 539 aaKnown RBP18.61■□□□□ 0.57
VARS-216ENST00000428445 SSRP1Q08945 709 aaKnown RBP18.61■□□□□ 0.57
VARS-216ENST00000428445 STK3Q13188 491 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 NPY5RQ15761 445 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 RARS2Q5T160 578 aaKnown RBP18.61■□□□□ 0.57
VARS-216ENST00000428445 TWF2Q6IBS0 349 aaKnown RBP18.61■□□□□ 0.57
VARS-216ENST00000428445 B3GNT9Q6UX72 402 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 KREMEN2Q8NCW0 462 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 CASP10Q92851 521 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 GBP3Q9H0R5 595 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 DNAJB4Q9UDY4 337 aa18.61■□□□□ 0.57
VARS-216ENST00000428445 IGKV6-21A0A0C4DH24 114 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 FSD2A1L4K1 749 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 M0R2N6 131 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 EPCAMP16422 314 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 HOXB8P17481 243 aaPredicted RBP18.6■□□□□ 0.57
VARS-216ENST00000428445 AFF1P51825 1210 aaKnown RBP18.6■□□□□ 0.57
VARS-216ENST00000428445 PTPN5P54829 565 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 EVCP57679 992 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 XKR3Q5GH77 459 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 ANO5Q75V66 913 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 BLIDQ8IZY5 108 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 ETNPPLQ8TBG4 499 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 NLRP4Q96MN2 994 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 ADAM7Q9H2U9 754 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 SH3GLB2Q9NR46 395 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 DACT1Q9NYF0 836 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 KCNJ14Q9UNX9 436 aa18.6■□□□□ 0.57
VARS-216ENST00000428445 PIN4Q9Y237 131 aaKnown RBP18.6■□□□□ 0.57
VARS-216ENST00000428445 CYP3A7-CYP3A51PA0A087WV96 503 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.59■□□□□ 0.57
VARS-216ENST00000428445 SLC37A4O43826 429 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 OFD1O75665 1012 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 BRD1O95696 1058 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 ASGR2P07307 311 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 CYP3A7P24462 503 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 NPEPPSP55786 919 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 INF2Q27J81 1249 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 RUFY3Q7L099 469 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 ZNF280BQ86YH2 543 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 TMEM169Q96HH4 297 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 RIPOR3Q96MK2 946 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 VN1R3Q9BXE9 311 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 ZBP1Q9H171 429 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 BMP2KQ9NSY1 1161 aaPredicted RBP18.59■□□□□ 0.57
VARS-216ENST00000428445 TBC1D13Q9NVG8 400 aa18.59■□□□□ 0.57
VARS-216ENST00000428445 MAFO75444 373 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms