RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 CAPN6Q9Y6Q1 641 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 PFASO15067 1338 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 DENND3A2RUS2 1198 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 BUB1O43683 1085 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 NCKAP1LP55160 1127 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 NAP1L1P55209 391 aaKnown RBP11.35□□□□□ -0.59
HDAC9-210ENST00000428307 AMPD2Q01433 879 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 ALCAMQ13740 583 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 IQCEQ6IPM2 695 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 TMEM161BQ8NDZ6 487 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 TIPINQ9BVW5 301 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 HSPBP1Q9NZL4 362 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 RBPJLQ9UBG7 517 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 TBX20Q9UMR3 447 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 SBF1O95248 1867 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 PARP14Q460N5 1801 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 PCNTO95613 3336 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 ANKRD63C9JTQ0 380 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 KRT13P13646 458 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 CNGA1P29973 690 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 GPR162Q16538 588 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 SLC18A3Q16572 532 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 RSRC2Q7L4I2 434 aaKnown RBP11.35□□□□□ -0.59
HDAC9-210ENST00000428307 DNAAF5Q86Y56 855 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 CEP112Q8N8E3 955 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 XXYLT1Q8NBI6 393 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
HDAC9-210ENST00000428307 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
HDAC9-210ENST00000428307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.59
HDAC9-210ENST00000428307 AGTPBP1Q9UPW5 1226 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 SAR1BQ9Y6B6 198 aa11.35□□□□□ -0.59
HDAC9-210ENST00000428307 GTPBP10A4D1E9 387 aaKnown RBP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 LRRN2O75325 713 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 CNMDO75829 334 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 DGAT1O75907 488 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ATP4AP20648 1035 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 UBA1P22314 1058 aaKnown RBP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ADSSP30520 456 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 GCLMP48507 274 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 PPP2R5AQ15172 486 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 TRAPPC11Q7Z392 1133 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 GOLGA1Q92805 767 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 SAAL1Q96ER3 474 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 CAPZA3Q96KX2 299 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 PACSIN1Q9BY11 444 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ST6GALNAC4Q9H4F1 302 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 XPNPEP1Q9NQW7 623 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ZNF302Q9NR11 478 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 DICER1Q9UPY3 1922 aaKnown RBP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 SYNGAP1Q96PV0 1343 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 FAM170AA1A519 330 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ZNF185O15231 689 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 TACC1O75410 805 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 GFPT2O94808 682 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ICAM3P32942 547 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 VAMP7P51809 220 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 MYL7Q01449 175 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 TUBB2AQ13885 445 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 KIAA0753Q2KHM9 967 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
HDAC9-210ENST00000428307 CBWD2Q8IUF1 395 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 TRIM58Q8NG06 486 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 PSMB7Q99436 277 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 TUBB2BQ9BVA1 445 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 DNAJC12Q9UKB3 198 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 KCNH4Q9UQ05 1017 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
HDAC9-210ENST00000428307 ADGRA3Q8IWK6 1321 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CTAGE15A4D2H0 777 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 GLTPD2A6NH11 291 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CTAGE8P0CG41 777 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 H2AFXP16104 143 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 PPIL2Q13356 520 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MYBPC2Q14324 1141 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 ARHGAP44Q17R89 818 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 WHAMMP3Q1A5X7 153 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 PAPD7Q5XG87 772 aaKnown RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CTAGE6Q86UF2 777 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CTAGE4Q8IX94 777 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 TMEM143Q96AN5 459 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CCDC127Q96BQ5 260 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms