RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SLC27A3Q5K4L6 730 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 C16orf86Q6ZW13 317 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 DNAAF3Q8N9W5 541 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 SAYSD1Q9NPB0 183 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 HERC5Q9UII4 1024 aaKnown RBP21.12■□□□□ 0.97
HCG18-235ENST00000426882 LINC00116Q8NCU8 138 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 NGRNQ9NPE2 291 aaKnown RBP21.12■□□□□ 0.97
HCG18-235ENST00000426882 PSMC5P62195 406 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 Q3C1V9 767 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 RBM41Q96IZ5 413 aaKnown RBP21.12■□□□□ 0.97
HCG18-235ENST00000426882 GINM1Q9NU53 330 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 PDHBP11177 359 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 LDHDQ86WU2 507 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 ANKRD7Q92527 254 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 LRRC4Q9HBW1 653 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 SMYD2Q9NRG4 433 aa21.12■□□□□ 0.97
HCG18-235ENST00000426882 ZBED1O96006 694 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 SLC18A3Q16572 532 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 HAUS6Q7Z4H7 955 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 ATF5Q9Y2D1 282 aaPredicted RBP21.11■□□□□ 0.97
HCG18-235ENST00000426882 PLS3P13797 630 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 PRPSAP1Q14558 356 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 MAPK6Q16659 721 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 CDO1Q16878 200 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 SWSAP1Q6NVH7 229 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 WRNIP1Q96S55 665 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 SSU72P8A0A1W2PR75 194 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 NYAP1Q6ZVC0 841 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 RSRC2Q7L4I2 434 aaKnown RBP21.11■□□□□ 0.97
HCG18-235ENST00000426882 ELOA2Q8IYF1 753 aaPredicted RBP21.11■□□□□ 0.97
HCG18-235ENST00000426882 GSTA1P08263 222 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 GSTA2P09210 222 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 ASPHQ12797 758 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 RAPH1Q70E73 1250 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 CALR3Q96L12 384 aaKnown RBP21.11■□□□□ 0.97
HCG18-235ENST00000426882 CRAMP1Q96RY5 1269 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 FUCA2Q9BTY2 467 aa21.11■□□□□ 0.97
HCG18-235ENST00000426882 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 PPP1R3GB7ZBB8 358 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 CASQ2O14958 399 aaPredicted RBP21.1■□□□□ 0.97
HCG18-235ENST00000426882 NDUFB10O96000 172 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 RFX1P22670 979 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 SLITRK6Q9H5Y7 841 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 CHRNA3P32297 505 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 PMS2P54278 862 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 GPR162Q16538 588 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 RNF25Q96BH1 459 aaPredicted RBP21.1■□□□□ 0.97
HCG18-235ENST00000426882 HSPH1Q92598 858 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 GBP5Q96PP8 586 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 MAP3K14Q99558 947 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 RBM43Q6ZSC3 357 aaKnown RBP21.1■□□□□ 0.97
HCG18-235ENST00000426882 TUFT1Q9NNX1 390 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 HOXC10Q9NYD6 342 aa21.1■□□□□ 0.97
HCG18-235ENST00000426882 RPSAP08865 295 aaKnown RBP21.09■□□□□ 0.97
HCG18-235ENST00000426882 FAM193BQ96PV7 902 aaPredicted RBP21.09■□□□□ 0.97
HCG18-235ENST00000426882 AMACRQ9UHK6 382 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 CCDC68Q9H2F9 335 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 TXLNGQ9NUQ3 528 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 IREB2P48200 963 aaKnown RBP21.09■□□□□ 0.97
HCG18-235ENST00000426882 REEP2Q9BRK0 252 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 CTIFO43310 598 aaKnown RBP21.09■□□□□ 0.97
HCG18-235ENST00000426882 GPC4O75487 556 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 ZNF18P17022 549 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 CFAP36Q96G28 342 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 FAM167AQ96KS9 214 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 FBXO40Q9UH90 709 aa21.09■□□□□ 0.97
HCG18-235ENST00000426882 AP5M1Q9H0R1 490 aa21.08■□□□□ 0.97
HCG18-235ENST00000426882 MAGED2Q9UNF1 606 aaPredicted RBP21.08■□□□□ 0.97
HCG18-235ENST00000426882 ZNF699Q32M78 642 aa21.08■□□□□ 0.97
HCG18-235ENST00000426882 SH2D4BQ5SQS7 431 aa21.08■□□□□ 0.97
HCG18-235ENST00000426882 FAM187AA6NFU0 413 aa21.08■□□□□ 0.96
HCG18-235ENST00000426882 SERPINB6P35237 376 aa21.08■□□□□ 0.96
HCG18-235ENST00000426882 SPOUT1Q5T280 376 aaKnown RBP21.08■□□□□ 0.96
HCG18-235ENST00000426882 PDCD7Q8N8D1 485 aaKnown RBP21.08■□□□□ 0.96
HCG18-235ENST00000426882 GJD4Q96KN9 370 aaPredicted RBP21.08■□□□□ 0.96
HCG18-235ENST00000426882 CPSF2Q9P2I0 782 aaKnown RBP21.08■□□□□ 0.96
HCG18-235ENST00000426882 PFASO15067 1338 aa21.08■□□□□ 0.96
HCG18-235ENST00000426882 PPP2R2AP63151 447 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 SPATA31A1Q5TZJ5 1347 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 FBXL13Q8NEE6 735 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 GSDMBQ8TAX9 411 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 PITPNM3Q9BZ71 974 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 NYAP2Q9P242 653 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 FBXL5Q9UKA1 691 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 HPSEQ9Y251 543 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 RASA4BC9J798 803 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 RASA4O43374 803 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 CALB1P05937 261 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 UCHL3P15374 230 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 MAGEA9P43362 315 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 PPP6R3Q5H9R7 873 aaPredicted RBP21.07■□□□□ 0.96
HCG18-235ENST00000426882 PCGF5Q86SE9 256 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 TADA2BQ86TJ2 420 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 TRIM59Q8IWR1 403 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 SRRM1Q8IYB3 904 aaKnown RBP21.07■□□□□ 0.96
HCG18-235ENST00000426882 MS4A14Q96JA4 679 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 ATP6V1G3Q96LB4 118 aa21.07■□□□□ 0.96
HCG18-235ENST00000426882 RNPC3Q96LT9 517 aaKnown RBP21.07■□□□□ 0.96
HCG18-235ENST00000426882 MTRQ99707 1265 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms