RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SNRPFP62306 86 aaKnown RBP29■■■□□ 2.23
LDB1-202ENST00000425280 FAM160B1Q5W0V3 765 aa29■■■□□ 2.23
LDB1-202ENST00000425280 CCDC62Q6P9F0 684 aa29■■■□□ 2.23
LDB1-202ENST00000425280 PTPN18Q99952 460 aa29■■■□□ 2.23
LDB1-202ENST00000425280 CBWD1Q9BRT8 395 aa29■■■□□ 2.23
LDB1-202ENST00000425280 PCIF1Q9H4Z3 704 aa29■■■□□ 2.23
LDB1-202ENST00000425280 ASB14A6NK59 587 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 SLC9A1P19634 815 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 CYLC1P35663 651 aaPredicted RBP28.99■■■□□ 2.23
LDB1-202ENST00000425280 STAT5BP51692 787 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 POLGP54098 1239 aaPredicted RBP28.99■■■□□ 2.23
LDB1-202ENST00000425280 EXOC3L4Q17RC7 722 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 ZNF792Q3KQV3 632 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 MAP4K3Q8IVH8 894 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 CEP89Q96ST8 783 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 PLCB1Q9NQ66 1216 aa28.99■■■□□ 2.23
LDB1-202ENST00000425280 DENND3A2RUS2 1198 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 PON1P27169 355 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 GTF2F1P35269 517 aaKnown RBP eCLIP28.98■■■□□ 2.232e-6■■■■□ 24.5
LDB1-202ENST00000425280 GNG11P61952 73 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 DHX33Q9H6R0 707 aaKnown RBP28.98■■■□□ 2.23
LDB1-202ENST00000425280 ARHGAP20Q9P2F6 1191 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 EXOC7Q9UPT5 735 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 ADGRA3Q8IWK6 1321 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 PLEKP08567 350 aaPredicted RBP28.98■■■□□ 2.23
LDB1-202ENST00000425280 ACTN1P12814 892 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 ADORA2AP29274 412 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 PPP2R5AQ15172 486 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 GBP6Q6ZN66 633 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 WDR24Q96S15 920 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 GPR20Q99678 358 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 PLXNA1Q9UIW2 1896 aa28.98■■■□□ 2.23
LDB1-202ENST00000425280 GTPBP10A4D1E9 387 aaKnown RBP28.97■■■□□ 2.23
LDB1-202ENST00000425280 ARHGAP25P42331 645 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 ARMCX2Q7L311 632 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 RDH13Q8NBN7 331 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 NUCKS1Q9H1E3 243 aaKnown RBP28.97■■■□□ 2.23
LDB1-202ENST00000425280 NRBP2Q9NSY0 501 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 HSPBP1Q9NZL4 362 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 EIF3CLB5ME19 914 aaKnown RBP28.97■■■□□ 2.23
LDB1-202ENST00000425280 HSDL1Q3SXM5 330 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 IFT74Q96LB3 600 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 EIF3CQ99613 913 aaKnown RBP28.97■■■□□ 2.23
LDB1-202ENST00000425280 IRX2Q9BZI1 471 aaPredicted RBP28.97■■■□□ 2.23
LDB1-202ENST00000425280 PDGFCQ9NRA1 345 aa28.97■■■□□ 2.23
LDB1-202ENST00000425280 ITGBL1O95965 494 aaPredicted RBP28.96■■■□□ 2.23
LDB1-202ENST00000425280 TARBP2Q15633 366 aaKnown RBP28.96■■■□□ 2.23
LDB1-202ENST00000425280 ARHGAP29Q52LW3 1261 aa28.96■■■□□ 2.23
LDB1-202ENST00000425280 ABRAQ8N0Z2 381 aa28.96■■■□□ 2.23
LDB1-202ENST00000425280 SYN2Q92777 582 aaPredicted RBP28.96■■■□□ 2.23
LDB1-202ENST00000425280 PARK7Q99497 189 aaKnown RBP28.96■■■□□ 2.23
LDB1-202ENST00000425280 ANKRD63C9JTQ0 380 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 ABL1P00519 1130 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 FMO5P49326 533 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 BFSP1Q12934 665 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 KLHDC7AQ5VTJ3 777 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 GPIHBP1Q8IV16 184 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 DHX37Q8IY37 1157 aaKnown RBP28.95■■■□□ 2.23
LDB1-202ENST00000425280 XXYLT1Q8NBI6 393 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 COPS5Q92905 334 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 TMEM143Q96AN5 459 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 CCDC42Q96M95 316 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 GCNT4Q9P109 453 aa28.95■■■□□ 2.23
LDB1-202ENST00000425280 LGR5O75473 907 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 TRIM49P0CI25 452 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 TRIM49CP0CI26 452 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 TXNP10599 105 aaKnown RBP28.95■■■□□ 2.22
LDB1-202ENST00000425280 KRT83P78385 493 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 TMEM63BQ5T3F8 832 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 SFMBT2Q5VUG0 894 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 ZSWIM2Q8NEG5 633 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 AZI2Q9H6S1 392 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 SIX2Q9NPC8 291 aa28.95■■■□□ 2.22
LDB1-202ENST00000425280 NOP56O00567 594 aaKnown RBP28.94■■■□□ 2.22
LDB1-202ENST00000425280 STRNO43815 780 aa28.94■■■□□ 2.22
LDB1-202ENST00000425280 EIF4A3P38919 411 aaKnown RBP28.94■■■□□ 2.22
LDB1-202ENST00000425280 TTLL4Q14679 1199 aa28.94■■■□□ 2.22
LDB1-202ENST00000425280 SPATA33Q96N06 139 aa28.94■■■□□ 2.22
LDB1-202ENST00000425280 ARHGAP28Q9P2N2 729 aa28.94■■■□□ 2.22
LDB1-202ENST00000425280 TLR2O60603 784 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 ADSSP30520 456 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 RFC5P40937 340 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 HUNKP57058 714 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 HGSNATQ68CP4 663 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 SCFD2Q8WU76 684 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 SLC7A3Q8WY07 619 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 DIS3Q9Y2L1 958 aaKnown RBP28.93■■■□□ 2.22
LDB1-202ENST00000425280 IVNS1ABPQ9Y6Y0 642 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 KRT13P13646 458 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 UCHL3P15374 230 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 CNGA1P29973 690 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 INTS8Q75QN2 995 aaKnown RBP28.93■■■□□ 2.22
LDB1-202ENST00000425280 TAS1R3Q7RTX0 852 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 ASAP3Q8TDY4 903 aa28.93■■■□□ 2.22
LDB1-202ENST00000425280 MAPK13O15264 365 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 KIF5CO60282 957 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 CASQ1P31415 396 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 ARL2P36404 184 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 CBWD6Q4V339 395 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 CBWD3Q5JTY5 395 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms