RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 N4BP3O15049 544 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 LGALS2P05162 132 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 TPM1P09493 284 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 HOXD13P35453 343 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 LRRC63Q05C16 580 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 KCNA1Q09470 495 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 EMC2Q15006 297 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 TARBP2Q15633 366 aaKnown RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 IRF2BP1Q8IU81 584 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 MCPH1Q8NEM0 835 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 ZNF507Q8TCN5 953 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 TSG101Q99816 390 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 KCTD10Q9H3F6 313 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 DYNC1LI2O43237 492 aaPredicted RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 PPFIA4O75335 1185 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 SLC26A2P50443 739 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 PEX3P56589 373 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 KNOP1Q1ED39 458 aaKnown RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 TRIB2Q92519 343 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 DHX33Q9H6R0 707 aaKnown RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 TRPC6Q9Y210 931 aa16.48■□□□□ 0.23
CALD1-206ENST00000424922 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
CALD1-206ENST00000424922 K7ENM7 598 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 EIF3DO15371 548 aaKnown RBP eCLIP16.47■□□□□ 0.23
CALD1-206ENST00000424922 MMP3P08254 477 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 BMT2Q1RMZ1 405 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 ZCWPW2Q504Y3 356 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 SLC7A3Q8WY07 619 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 ERAP1Q9NZ08 941 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 DNAI1Q9UI46 699 aa16.47■□□□□ 0.23
CALD1-206ENST00000424922 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 CD99L2Q8TCZ2 262 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 BSNDQ8WZ55 320 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 RNPEPQ9H4A4 650 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 PCDHB13Q9Y5F0 798 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 SLC16A4O15374 487 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 GYPCP04921 128 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 CCDC175P0C221 793 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 RFC5P40937 340 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 DMP1Q13316 513 aaPredicted RBP16.46■□□□□ 0.23
CALD1-206ENST00000424922 MFSD14CQ5VZR4 134 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 TOGARAM2Q6ZUX3 1019 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 TLK2Q86UE8 772 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 TMEM143Q96AN5 459 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 C16orf70Q9BSU1 422 aa16.46■□□□□ 0.23
CALD1-206ENST00000424922 POLR3FQ9H1D9 316 aaPredicted RBP16.46■□□□□ 0.23
CALD1-206ENST00000424922 CCDC169A6NNP5 214 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 ZBTB42B2RXF5 422 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 GPR25O00155 361 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
CALD1-206ENST00000424922 TBC1D8BQ0IIM8 1120 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 DGKDQ16760 1214 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 FOXR2Q6PJQ5 311 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 TRPV1Q8NER1 839 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 STRA6Q9BX79 667 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 IKZF4Q9H2S9 585 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 TAB2Q9NYJ8 693 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
CALD1-206ENST00000424922 ZMYM2Q9UBW7 1377 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 HBP1O60381 514 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 PPP1R37O75864 691 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 HOXD8P13378 290 aaPredicted RBP16.45■□□□□ 0.22
CALD1-206ENST00000424922 CASP14P31944 242 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 NPTX2P47972 431 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 SMTNP53814 917 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 FKBP3Q00688 224 aaKnown RBP16.45■□□□□ 0.22
CALD1-206ENST00000424922 DMTNQ08495 405 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 LRRC55Q6ZSA7 311 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 HAUS6Q7Z4H7 955 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 TRAPPC12Q8WVT3 735 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 VPS16Q9H269 839 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 C17orf75Q9HAS0 396 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 TMEM51Q9NW97 253 aa16.45■□□□□ 0.22
CALD1-206ENST00000424922 UBE4BO95155 1302 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 A6NJR5 290 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 H3BRB1 525 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 PDXKO00764 312 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 MAFO75444 373 aaPredicted RBP16.44■□□□□ 0.22
CALD1-206ENST00000424922 FGFR1OPO95684 399 aaKnown RBP16.44■□□□□ 0.22
CALD1-206ENST00000424922 NCKAP1LP55160 1127 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 IRX5P78411 483 aaPredicted RBP16.44■□□□□ 0.22
CALD1-206ENST00000424922 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 FAM114A1Q8IWE2 563 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 CNOT6LQ96LI5 555 aaKnown RBP16.44■□□□□ 0.22
CALD1-206ENST00000424922 KIFC3Q9BVG8 833 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 TUT1Q9H6E5 874 aaKnown RBP16.44■□□□□ 0.22
CALD1-206ENST00000424922 KMT5AQ9NQR1 393 aa16.44■□□□□ 0.22
CALD1-206ENST00000424922 TYW1Q9NV66 732 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms