RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 TIGD2Q4W5G0 525 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 BTBD8Q5XKL5 378 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 BRAPQ7Z569 592 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 LRRC47Q8N1G4 583 aaKnown RBP2.06□□□□□ -2.08
PMS1-210ENST00000424307 GPR150Q8NGU9 434 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.06□□□□□ -2.08
PMS1-210ENST00000424307 PTPRN2Q92932 1015 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 GFM2Q969S9 779 aaKnown RBP2.06□□□□□ -2.08
PMS1-210ENST00000424307 CDC6Q99741 560 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 CATSPERZQ9NTU4 200 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 GALNT8Q9NY28 637 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 Q9UFV3 132 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 NDOR1Q9UHB4 597 aa2.06□□□□□ -2.08
PMS1-210ENST00000424307 FAM83GA6ND36 823 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 E9PSI1 815 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 DVL2O14641 736 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 PROP1O75360 226 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 RECQL4O94761 1208 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 RAPGEF3O95398 923 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 AOAHP28039 575 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 STAT5BP51692 787 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 SQSTM1Q13501 440 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 CATSPEREQ5SY80 951 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 KANK2Q63ZY3 851 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 FBXO42Q6P3S6 717 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 C1QL2Q7Z5L3 287 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 CKAP2LQ8IYA6 745 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 GSTCDQ8NEC7 633 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 PMFBP1Q8TBY8 1022 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 SLC46A2Q9BY10 475 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 GPR87Q9BY21 358 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 TRIM39Q9HCM9 518 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 PRAMEF25A6NGN4 478 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 SCDO00767 359 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 PPP1R12AO14974 1030 aaPredicted RBP2.05□□□□□ -2.08
PMS1-210ENST00000424307 RPS6KA4O75676 772 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 GYPEP15421 78 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 MRE11P49959 708 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 KCNQ1P51787 676 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 CD83Q01151 205 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 RIN1Q13671 783 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 OVCH1Q7RTY7 1134 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 CAGE1Q8TC20 777 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 ASB15Q8WXK1 588 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 MYEOVQ96EZ4 313 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 ALG1Q9BT22 464 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 DHRS4Q9BTZ2 278 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 CCDC113Q9H0I3 377 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 AGO3Q9H9G7 860 aaKnown RBP2.05□□□□□ -2.08
PMS1-210ENST00000424307 ARHGAP28Q9P2N2 729 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 CLCA2Q9UQC9 943 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 PTCH2Q9Y6C5 1203 aa2.05□□□□□ -2.08
PMS1-210ENST00000424307 COL11A2P13942 1736 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 TCRBV16S1A1N1A0A5B0 115 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 GAGE12BA1L429 117 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 LCHNA4D1U4 455 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 IQCA1LA6NCM1 817 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 GAGE12HA6NDE8 117 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 ZBTB48P10074 688 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 ATP2B1P20020 1258 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 PTGS1P23219 599 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 PTX3P26022 381 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 PTTG1IPP53801 180 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 RBL2Q08999 1139 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 MAP3K12Q12852 859 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 ARMC6Q6NXE6 501 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 FAM111BQ6SJ93 734 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 MAMDC2Q7Z304 686 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 IGSF22Q8N9C0 903 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 FOXRED1Q96CU9 486 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 SRPK1Q96SB4 655 aaKnown RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 MS4A5Q9H3V2 200 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 INCENPQ9NQS7 918 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 H2AFY2Q9P0M6 372 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 PPP1R1BQ9UD71 204 aaPredicted RBP2.04□□□□□ -2.08
PMS1-210ENST00000424307 FRMD4BQ9Y2L6 1034 aa2.04□□□□□ -2.08
PMS1-210ENST00000424307 A0A1W2PRX2 142 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 GLRX3O76003 335 aaKnown RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 LAG3P18627 525 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 SDSP20132 328 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 ANTXR2P58335 489 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 SUMO1P63165 101 aaKnown RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 FOXF2Q12947 444 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 BMS1Q14692 1282 aaKnown RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 GPR19Q15760 415 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 FIGNQ5HY92 759 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 KLHDC10Q6PID8 442 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 JMYQ8N9B5 988 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 OR14K1Q8NGZ2 314 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 ERCC4Q92889 916 aaPredicted RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 FBXW5Q969U6 566 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 SPATA5L1Q9BVQ7 753 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 NCOA5Q9HCD5 579 aaKnown RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 SH3BP1Q9Y3L3 701 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 ATP23Q9Y6H3 246 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 ARHGEF17Q96PE2 2063 aaPredicted RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 SPATA31A6Q5VVP1 1343 aa2.03□□□□□ -2.08
PMS1-210ENST00000424307 KLRG2A4D1S0 409 aaPredicted RBP2.03□□□□□ -2.08
PMS1-210ENST00000424307 TMEM200CA6NKL6 621 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms