RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 BTAF1O14981 1849 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 LY75O60449 1722 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L11C9JVI0 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 PMM2O15305 246 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 RFC4P35249 363 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 CASP4P49662 377 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 PSMC6P62333 389 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
C9orf3-204ENST00000424143 DRAP1Q14919 205 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-204ENST00000424143 DCAF17Q5H9S7 520 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L6PQ6QN14 398 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 HHIPL2Q6UWX4 724 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 CYFIP1Q7L576 1253 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 UBL4BQ8N7F7 174 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 CCHCR1Q8TD31 782 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 AMNQ9BXJ7 453 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 GPR88Q9GZN0 384 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 COA1Q9GZY4 146 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 NSRP1Q9H0G5 558 aaKnown RBP16.47■□□□□ 0.23
C9orf3-204ENST00000424143 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 GOLPH3Q9H4A6 298 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 SLC12A4Q9UP95 1085 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 RABGAP1Q9Y3P9 1069 aa16.47■□□□□ 0.23
C9orf3-204ENST00000424143 ZMYM2Q9UBW7 1377 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 LOXHD1Q8IVV2 1947 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 PIK3CDO00329 1044 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 CAND2O75155 1236 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
C9orf3-204ENST00000424143 RARGP13631 454 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 TNFAIP3P21580 790 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 STAT3P40763 770 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 TCERG1LQ5VWI1 586 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 RINT1Q6NUQ1 792 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 SLCO2A1Q92959 643 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
C9orf3-204ENST00000424143 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 ATP6V0A4Q9HBG4 840 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 GRHL1Q9NZI5 618 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 APEX2Q9UBZ4 518 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 ODF2LQ9ULJ1 636 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 ATP8A1Q9Y2Q0 1164 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 PCDHA3Q9Y5H8 950 aa16.46■□□□□ 0.23
C9orf3-204ENST00000424143 CTNND1O60716 968 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GCNT3O95395 438 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 C1orf186Q6ZWK4 172 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 TRMT10CQ7L0Y3 403 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 HS2ST1Q7LGA3 356 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 C12orf50Q8NA57 414 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GJA10Q969M2 543 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 RNF25Q96BH1 459 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 WNT8AQ9H1J5 351 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 DPH5Q9H2P9 285 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 DONSONQ9NYP3 566 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 TPX2Q9ULW0 747 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 DCDC2CA8MYV0 355 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 MAPK13O15264 365 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 RGS16O15492 202 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GZMAP12544 262 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 CHN1P15882 459 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 PRR16Q569H4 304 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 TAOK1Q7L7X3 1001 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GLYCTKQ8IVS8 523 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GIMAP7Q8NHV1 300 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 AGPAT1Q99943 283 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 EIF2AK1Q9BQI3 630 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 RUSC1Q9BVN2 902 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 INTS2Q9H0H0 1204 aaKnown RBP16.45■□□□□ 0.22
C9orf3-204ENST00000424143 CD248Q9HCU0 757 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 POLD4Q9HCU8 107 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
C9orf3-204ENST00000424143 SPATA31A6Q5VVP1 1343 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 A0A1B0GUA9 196 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 SPDYE3A6NKU9 549 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 PHF20L1A8MW92 1017 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 MSH4O15457 936 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms