RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 UPP2O95045 317 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 SIK1P57059 783 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 COPS2P61201 443 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 BNIP1Q12981 228 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 DHX34Q14147 1143 aaKnown RBP18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 LONRF1Q17RB8 773 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 TNFAIP8L3Q5GJ75 292 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 CDCA2Q69YH5 1023 aaPredicted RBP18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 C16orf86Q6ZW13 317 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 PRELID2Q8N945 189 aa18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 DHX36Q9H2U1 1008 aaKnown RBP18.01■□□□□ 0.47
NPC1L1-203ENST00000423141 SMNDC1O75940 238 aaKnown RBP eCLIP18■□□□□ 0.47
NPC1L1-203ENST00000423141 TMEM253P0C7T8 217 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 IRX1P78414 480 aaPredicted RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 ZKSCAN8Q15776 578 aaPredicted RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 CCDC25Q86WR0 208 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 FITM2Q8N6M3 262 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 KCNV2Q8TDN2 545 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 CTNNBL1Q8WYA6 563 aaPredicted RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 SEPT11Q9NVA2 429 aaKnown RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 CNOT7Q9UIV1 285 aaKnown RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 RSPH10B2B2RC85 870 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 NR3C1P04150 777 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 RSPH10BP0C881 870 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 FERP16591 822 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 CCND1P24385 295 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 ANXA13P27216 316 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 SMARCA1P28370 1054 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 STAT1P42224 750 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 PABPC4Q13310 644 aaKnown RBP eCLIP18■□□□□ 0.47
NPC1L1-203ENST00000423141 GIT2Q14161 759 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 NUGGCQ68CJ6 796 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 CAPRIN2Q6IMN6 1127 aaKnown RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 CRAMP1Q96RY5 1269 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 REEP2Q9BRK0 252 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 FAM167BQ9BTA0 163 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 ADAM22Q9P0K1 906 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 CHORDC1Q9UHD1 332 aaPredicted RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 PTPN22Q9Y2R2 807 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 PCDHA3Q9Y5H8 950 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 NAV1Q8NEY1 1877 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 ASTN1O14525 1302 aa18■□□□□ 0.47
NPC1L1-203ENST00000423141 DDX60LQ5H9U9 1706 aaKnown RBP18■□□□□ 0.47
NPC1L1-203ENST00000423141 BAG3O95817 575 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 NT5C2P49902 561 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 DRG2P55039 364 aaKnown RBP17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 TBC1D16Q8TBP0 767 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 RASAL2Q9UJF2 1139 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ABCA3Q99758 1704 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ATP8B3O60423 1300 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 TCRBV7S2A1N4TA0A589 114 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 TMEM120BA0PK00 339 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 GH1P01241 217 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 SOX5P35711 763 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ABL2P42684 1182 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 MSH2P43246 934 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 CLK2P49760 499 aaKnown RBP17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ANKRD20A2Q5SQ80 823 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ANKRD20A1Q5TYW2 823 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ANKRD20A3Q5VUR7 823 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 MIS18BP1Q6P0N0 1132 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ANKRD42Q8N9B4 389 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ARMC2Q8NEN0 867 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 GDAP1Q8TB36 358 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 NAP1L3Q99457 506 aaPredicted RBP17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ARHGEF3Q9NR81 526 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 CTNNAL1Q9UBT7 734 aa17.99■□□□□ 0.47
NPC1L1-203ENST00000423141 ENO4A6NNW6 628 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 PHF2O75151 1096 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 ZNF131P52739 623 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 DRAP1Q14919 205 aaPredicted RBP17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 EPM2AIP1Q7L775 607 aaPredicted RBP17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 GPR101Q96P66 508 aaPredicted RBP17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 PFASO15067 1338 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 TMEM110-MUSTN1A8MSY1 372 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 SUN1O94901 812 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 C11orf91Q3C1V1 193 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 TTBK2Q6IQ55 1244 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 VSTM1Q6UX27 236 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 ASRGL1Q7L266 308 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 GPR88Q9GZN0 384 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 JMJD4Q9H9V9 463 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 DIS3Q9Y2L1 958 aaKnown RBP17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 ALG6Q9Y672 507 aa17.98■□□□□ 0.47
NPC1L1-203ENST00000423141 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 ACSL3O95573 720 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 SLC16A2P36021 539 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 KCNJ1P48048 391 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 PPP2R5EQ16537 467 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 CCDC137Q6PK04 289 aaKnown RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 CATSPER3Q86XQ3 398 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 POP1Q99575 1024 aaKnown RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 SYT11Q9BT88 431 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 TMEM109Q9BVC6 243 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms