RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 BSPRYQ5W0U4 402 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 ANKRD40Q6AI12 368 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 INTS8Q75QN2 995 aaKnown RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 ARMCX2Q7L311 632 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 LRRC8AQ8IWT6 810 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 SMAP1Q8IYB5 467 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 CEP112Q8N8E3 955 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 PITPNM2Q9BZ72 1349 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 TLDC2A0PJX2 215 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 SPDYE5A6NIY4 337 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 HUS1O60921 280 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 CPT1AP50416 773 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 HADHQ16836 314 aaKnown RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 DAAM2Q86T65 1068 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 VIRMAQ69YN4 1812 aaKnown RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 MYO1FO00160 1098 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 MAGEB2O15479 319 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 GFPT2O94808 682 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 TCF7P36402 384 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 RBL2Q08999 1139 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 Q4G0T1 1027 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 NAALADL2Q58DX5 795 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 DHX40Q8IX18 779 aaKnown RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 BEST2Q8NFU1 509 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 SEL1LQ9UBV2 794 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 RIPK3Q9Y572 518 aa10.53□□□□□ -0.72
CMSS1-201ENST00000421999 SMIM23A6NLE4 172 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 RPS6KA5O75582 802 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 RHOBTB3O94955 611 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 CNTNAP1P78357 1384 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 BIRC2Q13490 618 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 PPP4R3CPQ6ZMV5 832 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 SIX6OS1Q8N1H7 587 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 KIAA1524Q8TCG1 905 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 MTRF1LQ9UGC7 380 aaKnown RBP10.52□□□□□ -0.72
CMSS1-201ENST00000421999 ASIC3Q9UHC3 531 aa10.52□□□□□ -0.72
CMSS1-201ENST00000421999 PRKCBP05771 671 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ANXA13P27216 316 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 PSMC6P62333 389 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ZC2HC1CQ53FD0 456 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ELMSAN1Q6PJG2 1045 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ARRDC4Q8NCT1 418 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 NAPGQ99747 312 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 POLR3CQ9BUI4 534 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 RNF208Q9H0X6 261 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 BUB1O43683 1085 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 HBP1O60381 514 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 CYP11B2P19099 503 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 VAV2P52735 878 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 EFNA5P52803 228 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 SYCE1Q8N0S2 351 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ADSSL1Q8N142 457 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 SAMD3Q8N6K7 520 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 CCDC51Q96ER9 411 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 AMFRQ9UKV5 643 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 SNCAIPQ9Y6H5 919 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 SNED1Q8TER0 1413 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 A0A087X0B3 334 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 RSPH10B2B2RC85 870 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 OATP04181 439 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 RSPH10BP0C881 870 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 FERP16591 822 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ADORA2AP29274 412 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 INHBEP58166 350 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 IQCB1Q15051 598 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 CCDC14Q49A88 953 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 ZNF746Q6NUN9 644 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 KSR1Q8IVT5 923 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 IL31RAQ8NI17 732 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 DPF3Q92784 378 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 AGO4Q9HCK5 861 aaKnown RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 TYW1Q9NV66 732 aaKnown RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 CYP39A1Q9NYL5 469 aa10.52□□□□□ -0.73
CMSS1-201ENST00000421999 AGO2Q9UKV8 859 aaKnown RBP10.52□□□□□ -0.73
CMSS1-201ENST00000421999 PLIN4Q96Q06 1357 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 TYW5A2RUC4 315 aaKnown RBP10.51□□□□□ -0.73
CMSS1-201ENST00000421999 NLRP11P59045 1033 aaKnown RBP10.51□□□□□ -0.73
CMSS1-201ENST00000421999 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 KIAA1755Q5JYT7 1200 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 EFCAB12Q6NXP0 572 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 PHLDB2Q86SQ0 1253 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 SYT2Q8N9I0 419 aaPredicted RBP10.51□□□□□ -0.73
CMSS1-201ENST00000421999 RNF139Q8WU17 664 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 RUSC1Q9BVN2 902 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 BAZ2AQ9UIF9 1905 aaKnown RBP10.51□□□□□ -0.73
CMSS1-201ENST00000421999 PHLPP2Q6ZVD8 1323 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 EML1O00423 815 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 TEX33O43247 280 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 STRNO43815 780 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 TUBB4AP04350 444 aa10.51□□□□□ -0.73
CMSS1-201ENST00000421999 ALDH5A1P51649 535 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms