RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SEPT1Q8WYJ6 367 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 FGF14Q92915 247 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
UFD1-203ENST00000421968 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 WDFY3Q8IZQ1 3526 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 SMIM35A0A1B0GVV1 85 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 GSTTP1A0A1W2PQM5 241 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
UFD1-203ENST00000421968 RFPL2O75678 378 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 STAM2O75886 525 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
UFD1-203ENST00000421968 DSC3Q14574 896 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 ZKSCAN2Q63HK3 967 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 ELMSAN1Q6PJG2 1045 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 PARM1Q6UWI2 310 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
UFD1-203ENST00000421968 HELQQ8TDG4 1101 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 PHKBQ93100 1093 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 IGSF21Q96ID5 467 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 TTC14Q96N46 770 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 BBC3Q96PG8 261 aaPredicted RBP13.72□□□□□ -0.21
UFD1-203ENST00000421968 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
UFD1-203ENST00000421968 MRPL9Q9BYD2 267 aaKnown RBP13.72□□□□□ -0.21
UFD1-203ENST00000421968 MRPS17Q9Y2R5 130 aaKnown RBP13.72□□□□□ -0.21
UFD1-203ENST00000421968 ZNF316A6NFI3 1004 aaPredicted RBP13.71□□□□□ -0.21
UFD1-203ENST00000421968 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
UFD1-203ENST00000421968 AXIN1O15169 862 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 ZNF806P0C7X5 589 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 ADCY1Q08828 1119 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 FZD5Q13467 585 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 PLCB4Q15147 1175 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 ZNF852Q6ZMS4 543 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 CEP68Q76N32 757 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 GIMAP8Q8ND71 665 aaPredicted RBP13.71□□□□□ -0.21
UFD1-203ENST00000421968 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
UFD1-203ENST00000421968 ARRDC1-AS1Q9H2J1 176 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 JMJD4Q9H9V9 463 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 DPP7Q9UHL4 492 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 ANAPC4Q9UJX5 808 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
UFD1-203ENST00000421968 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 CNR2P34972 360 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 FNTBP49356 437 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 CCR3P51677 355 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 FAM228AQ86W67 206 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 ECHDC2Q86YB7 292 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 BCL7CQ8WUZ0 217 aaPredicted RBP13.7□□□□□ -0.22
UFD1-203ENST00000421968 ZNF707Q96C28 371 aaPredicted RBP13.7□□□□□ -0.22
UFD1-203ENST00000421968 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 CHRDQ9H2X0 955 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 ZFP37Q9Y6Q3 630 aaPredicted RBP13.7□□□□□ -0.22
UFD1-203ENST00000421968 SPAG17Q6Q759 2223 aa13.7□□□□□ -0.22
UFD1-203ENST00000421968 DOCK6Q96HP0 2047 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 HECTD1Q9ULT8 2610 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 FGRP09769 529 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
UFD1-203ENST00000421968 COL28A1Q2UY09 1125 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 RNF43Q68DV7 783 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
UFD1-203ENST00000421968 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 OSMRQ99650 979 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
UFD1-203ENST00000421968 EVPLQ92817 2033 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 GLUD1P00367 558 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 KIZQ2M2Z5 673 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 MTSS1LQ765P7 747 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
UFD1-203ENST00000421968 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
UFD1-203ENST00000421968 LAMA5O15230 3695 aa13.68□□□□□ -0.22
UFD1-203ENST00000421968 USP9XQ93008 2570 aaPredicted RBP13.68□□□□□ -0.22
UFD1-203ENST00000421968 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 C2CD2LO14523 706 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 LILRB3O75022 631 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 ATP9AO75110 1047 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 ADH1AP07327 375 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 GALTP07902 379 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 FSHRP23945 695 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 KLRC1P26715 233 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 CXCL12P48061 93 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 CRYBB1P53674 252 aaPredicted RBP13.67□□□□□ -0.22
UFD1-203ENST00000421968 C19orf57Q0VDD7 668 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 KIAA1211LQ6NV74 962 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 NLRX1Q86UT6 975 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 PNMA1Q8ND90 353 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 IER2Q9BTL4 223 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 AZI2Q9H6S1 392 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 HEBP1Q9NRV9 189 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 CACNA2D2Q9NY47 1150 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 CDH7Q9ULB5 785 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms