RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TRAF3IP3Q9Y228 551 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 ATP8A1Q9Y2Q0 1164 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 RRP15Q9Y3B9 282 aaKnown RBP14.49□□□□□ -0.09
MCF2L-213ENST00000421756 RREB1Q92766 1687 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 HGSO14964 777 aaPredicted RBP14.49□□□□□ -0.09
MCF2L-213ENST00000421756 ERVK-9P63128 1117 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 ADCY1Q08828 1119 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 SNX1Q13596 522 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 TRIP13Q15645 432 aaPredicted RBP14.49□□□□□ -0.09
MCF2L-213ENST00000421756 SLC15A2Q16348 729 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 TTMPQ5BVD1 217 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 HYIQ5T013 277 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 MEI1Q5TIA1 1274 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 AENQ8WTP8 325 aaKnown RBP14.49□□□□□ -0.09
MCF2L-213ENST00000421756 CWC15Q9P013 229 aaKnown RBP14.49□□□□□ -0.09
MCF2L-213ENST00000421756 RIPK3Q9Y572 518 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 PITPNM2Q9BZ72 1349 aa14.49□□□□□ -0.09
MCF2L-213ENST00000421756 DLEC1Q9Y238 1755 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 CAP2P40123 477 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 SLCO1A2P46721 670 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 KCNJ1P48048 391 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 NT5C2P49902 561 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 EPHB4P54760 987 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 ITGB3BPQ13352 177 aaPredicted RBP14.48□□□□□ -0.09
MCF2L-213ENST00000421756 ARHGEF16Q5VV41 709 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 MMGT1Q8N4V1 131 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 TPCN2Q8NHX9 752 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 SIX2Q9NPC8 291 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 PLAAQ9Y263 795 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 MYO1CO00159 1063 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 ENTPD3O75355 529 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 TNNC1P63316 161 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 USP38Q8NB14 1042 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 GOLGA5Q8TBA6 731 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 JDP2Q8WYK2 163 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 CAPS2Q9BXY5 557 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 NEUROG2Q9H2A3 272 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 AIPL1Q9NZN9 384 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 SNX24Q9Y343 169 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 FTLP02792 175 aaPredicted RBP14.48□□□□□ -0.09
MCF2L-213ENST00000421756 RXRBP28702 533 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 WDR78Q5VTH9 848 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 DAW1Q8N136 415 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 FAM151AQ8WW52 585 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 ATG4CQ96DT6 458 aa14.48□□□□□ -0.09
MCF2L-213ENST00000421756 NUCKS1Q9H1E3 243 aaKnown RBP14.48□□□□□ -0.09
MCF2L-213ENST00000421756 METTL14Q9HCE5 456 aaKnown RBP14.48□□□□□ -0.09
MCF2L-213ENST00000421756 CTNNA1P35221 906 aaKnown RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 LIG3P49916 1009 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 PLTPP55058 493 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 BAATQ14032 418 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 TNIP1Q15025 636 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 HAUS6Q7Z4H7 955 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 PASD1Q8IV76 773 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 RPUSD2Q8IZ73 545 aaKnown RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 CRYGNQ8WXF5 182 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 LRRC4CQ9HCJ2 640 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 LARSQ9P2J5 1176 aaKnown RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 AMFRQ9UKV5 643 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 F8VZ95 297 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 SGPL1O95470 568 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 SOX5P35711 763 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 HMGCS2P54868 508 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 IFFO1Q0D2I5 559 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 PAK2Q13177 524 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 NBPF12Q5TAG4 269 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 TAB3Q8N5C8 712 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 RNF10Q8N5U6 811 aaKnown RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 TARSL2A2RTX5 802 aaKnown RBP14.47□□□□□ -0.09
MCF2L-213ENST00000421756 TMOD1P28289 359 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 KRT35Q92764 455 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 MXRA8Q9BRK3 442 aa14.47□□□□□ -0.09
MCF2L-213ENST00000421756 PJA2O43164 708 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 YWHABP31946 246 aaKnown RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 COBLL1Q53SF7 1204 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 CEP170P1Q96L14 293 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 PPP1R16BQ96T49 567 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 HERC5Q9UII4 1024 aaKnown RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 ZMYM2Q9UBW7 1377 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 CDK5RAP2Q96SN8 1893 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 SLX4Q8IY92 1834 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 PGRMC1O00264 195 aaKnown RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 NDUFAB1O14561 156 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 TUBB4BP68371 445 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 MRPS9P82933 396 aaKnown RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 BFSP1Q12934 665 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 EPM2AIP1Q7L775 607 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 SLC47A2Q86VL8 602 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 POMGNT1Q8WZA1 660 aa14.46□□□□□ -0.09
MCF2L-213ENST00000421756 INPP4AQ96PE3 977 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 POLR3CQ9BUI4 534 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-213ENST00000421756 ANKRD63C9JTQ0 380 aa14.45□□□□□ -0.1
MCF2L-213ENST00000421756 TBX3O15119 743 aa14.45□□□□□ -0.1
MCF2L-213ENST00000421756 SPOPO43791 374 aa14.45□□□□□ -0.1
MCF2L-213ENST00000421756 MTERF2Q49AM1 385 aa14.45□□□□□ -0.1
MCF2L-213ENST00000421756 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
MCF2L-213ENST00000421756 SWSAP1Q6NVH7 229 aa14.45□□□□□ -0.1
MCF2L-213ENST00000421756 ADAM33Q9BZ11 813 aa14.45□□□□□ -0.1
MCF2L-213ENST00000421756 RPAP3Q9H6T3 665 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms