RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 RSPH10BP0C881 870 aa23■■□□□ 1.27
USP48-205ENST00000421625 STAT1P42224 750 aa23■■□□□ 1.27
USP48-205ENST00000421625 NCALDP61601 193 aa23■■□□□ 1.27
USP48-205ENST00000421625 MTMR4Q9NYA4 1195 aa23■■□□□ 1.27
USP48-205ENST00000421625 CFAP73A6NFT4 308 aa23■■□□□ 1.27
USP48-205ENST00000421625 CALUO43852 315 aaPredicted RBP23■■□□□ 1.27
USP48-205ENST00000421625 RARAP10276 462 aa23■■□□□ 1.27
USP48-205ENST00000421625 COL23A1Q86Y22 540 aaPredicted RBP23■■□□□ 1.27
USP48-205ENST00000421625 CTNNBL1Q8WYA6 563 aaPredicted RBP23■■□□□ 1.27
USP48-205ENST00000421625 PRCCQ92733 491 aaPredicted RBP23■■□□□ 1.27
USP48-205ENST00000421625 TRIM6Q9C030 488 aaPredicted RBP23■■□□□ 1.27
USP48-205ENST00000421625 CCDC134Q9H6E4 229 aa23■■□□□ 1.27
USP48-205ENST00000421625 COG5Q9UP83 839 aa23■■□□□ 1.27
USP48-205ENST00000421625 NHSQ6T4R5 1651 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 LDHCP07864 332 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 PTGIRP43119 386 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 DHX34Q14147 1143 aaKnown RBP22.99■■□□□ 1.27
USP48-205ENST00000421625 LRRC14Q15048 493 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 CNGA2Q16280 664 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 C6orf118Q5T5N4 469 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 PALB2Q86YC2 1186 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 L3MBTL3Q96JM7 780 aaPredicted RBP22.99■■□□□ 1.27
USP48-205ENST00000421625 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
USP48-205ENST00000421625 THAP2Q9H0W7 228 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L15C9J2P7 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L13C9JLJ4 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L11C9JVI0 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L18D6R9N7 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L22D6RA61 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L17D6RBQ6 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L19D6RCP7 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L20D6RJB6 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 PDXKO00764 312 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 SNX3O60493 162 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 NQO1P15559 274 aaKnown RBP22.99■■□□□ 1.27
USP48-205ENST00000421625 SOX5P35711 763 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 ALDH5A1P51649 535 aaPredicted RBP22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L24Q0WX57 530 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 USP17L6PQ6QN14 398 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 CATSPER3Q86XQ3 398 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 NAP1L3Q99457 506 aaPredicted RBP22.99■■□□□ 1.27
USP48-205ENST00000421625 PSTPIP2Q9H939 334 aa22.99■■□□□ 1.27
USP48-205ENST00000421625 VCAM1P19320 739 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 SLC8A3P57103 927 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 ADCY2Q08462 1091 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 ZNF268Q14587 947 aaPredicted RBP22.98■■□□□ 1.27
USP48-205ENST00000421625 MAB21L3Q8N8X9 362 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 MGARPQ8TDB4 240 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 ECT2Q9H8V3 914 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 SEPT11Q9NVA2 429 aaKnown RBP22.98■■□□□ 1.27
USP48-205ENST00000421625 DIS3Q9Y2L1 958 aaKnown RBP22.98■■□□□ 1.27
USP48-205ENST00000421625 A8MUI8 341 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 SBF2Q86WG5 1849 aa22.98■■□□□ 1.27
USP48-205ENST00000421625 PLCG2P16885 1265 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 LMNB1P20700 586 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 MARCKSL1P49006 195 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 AUHQ13825 339 aaKnown RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 DRAP1Q14919 205 aaPredicted RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 PPP1R18Q6NYC8 613 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 TTC27Q6P3X3 843 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 NBPF5PQ86XG9 351 aaPredicted RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 NSRP1Q9H0G5 558 aaKnown RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 TYW1Q9NV66 732 aaKnown RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 RASAL2Q9UJF2 1139 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 SPATA31A6Q5VVP1 1343 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 USP17L10C9JJH3 530 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 IGF2BP3O00425 579 aaKnown RBP eCLIP22.97■■□□□ 1.27
USP48-205ENST00000421625 SNHG28P0DPA3 235 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 AKR1B1P15121 316 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 CDC25CP30307 473 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 PPP2R5EQ16537 467 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 ZDHHC14Q8IZN3 488 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 KIF2BQ8N4N8 673 aa22.97■■□□□ 1.27
USP48-205ENST00000421625 METTL14Q9HCE5 456 aaKnown RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 GOLGB1Q14789 3259 aaKnown RBP22.97■■□□□ 1.27
USP48-205ENST00000421625 TM4SF1P30408 202 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 DRG2P55039 364 aaKnown RBP22.96■■□□□ 1.27
USP48-205ENST00000421625 PRELID2Q8N945 189 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 KRT35Q92764 455 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 FGFR1OP2Q9NVK5 253 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 ATF5Q9Y2D1 282 aaPredicted RBP22.96■■□□□ 1.27
USP48-205ENST00000421625 ANKRD63C9JTQ0 380 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 RASGRF2O14827 1237 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 RIPK2O43353 540 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 PHF2O75151 1096 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 GCNT3O95395 438 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 OAS1P00973 400 aaKnown RBP22.96■■□□□ 1.27
USP48-205ENST00000421625 ZNF543Q08ER8 600 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 FMNL3Q8IVF7 1028 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 ZNF570Q96NI8 536 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 SYT11Q9BT88 431 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 CNOT7Q9UIV1 285 aaKnown RBP22.96■■□□□ 1.27
USP48-205ENST00000421625 DNAJC12Q9UKB3 198 aa22.96■■□□□ 1.27
USP48-205ENST00000421625 OTUD6AQ7L8S5 288 aa22.95■■□□□ 1.27
USP48-205ENST00000421625 CERKQ8TCT0 537 aa22.95■■□□□ 1.27
USP48-205ENST00000421625 GPR88Q9GZN0 384 aa22.95■■□□□ 1.27
USP48-205ENST00000421625 GPR75-ASB3A0A0A6YYF3 556 aa22.95■■□□□ 1.26
USP48-205ENST00000421625 SLC16A3O15427 465 aaKnown RBP22.95■■□□□ 1.26
USP48-205ENST00000421625 ALADP13716 330 aa22.95■■□□□ 1.26
USP48-205ENST00000421625 DPP8Q6V1X1 898 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms