RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 ZNF746Q6NUN9 644 aaPredicted RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 SWSAP1Q6NVH7 229 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 ARHGAP27Q6ZUM4 889 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 ADAT2Q7Z6V5 191 aaKnown RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 KRT12Q99456 494 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 INTS2Q9H0H0 1204 aaKnown RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 PXMP2Q9NR77 195 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 UBIAD1Q9Y5Z9 338 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 PJA2O43164 708 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 H2AFZP0C0S5 128 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 PPARDQ03181 441 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 RPS6KA1Q15418 735 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 DCAF15Q66K64 600 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 H2AFVQ71UI9 128 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 DAAM2Q86T65 1068 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 ZC3H3Q8IXZ2 948 aaKnown RBP11.91□□□□□ -0.5
DDX56-203ENST00000421223 ACP6Q9NPH0 428 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 PLCB1Q9NQ66 1216 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 SEL1LQ9UBV2 794 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 GRID2IPA4D2P6 1211 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 MAP2K1Q02750 393 aaPredicted RBP11.91□□□□□ -0.5
DDX56-203ENST00000421223 BFSP1Q12934 665 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 MAP9Q49MG5 647 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 EEPD1Q7L9B9 569 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 RNF10Q8N5U6 811 aaKnown RBP11.91□□□□□ -0.5
DDX56-203ENST00000421223 BICD1Q96G01 975 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 RPGRIP1Q96KN7 1286 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 AP1M1Q9BXS5 423 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 TBC1D22BQ9NU19 505 aa11.91□□□□□ -0.5
DDX56-203ENST00000421223 COL2A1P02458 1487 aaPredicted RBP11.9□□□□□ -0.5
DDX56-203ENST00000421223 FOXN3O00409 490 aaPredicted RBP11.9□□□□□ -0.5
DDX56-203ENST00000421223 DDX3XO00571 662 aaKnown RBP eCLIP11.9□□□□□ -0.51e-7■■■■□ 23.6
DDX56-203ENST00000421223 DLATP10515 647 aaKnown RBP11.9□□□□□ -0.5
DDX56-203ENST00000421223 PTPRAP18433 802 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 NAA35Q5VZE5 725 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 PPM1KQ8N3J5 372 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.5
DDX56-203ENST00000421223 KAT5Q92993 513 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 ACCSQ96QU6 501 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 OSGEPQ9NPF4 335 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 MAP2K7O14733 419 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 VAMP7P51809 220 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 GALCP54803 685 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 PHLDB3Q6NSJ2 640 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 CYFIP1Q7L576 1253 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 SCYL3Q8IZE3 742 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 HSPBP1Q9NZL4 362 aa11.9□□□□□ -0.5
DDX56-203ENST00000421223 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
DDX56-203ENST00000421223 PLS3P13797 630 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 SOX5P35711 763 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 ZNF131P52739 623 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
DDX56-203ENST00000421223 PSMC5P62195 406 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 GUCY2DQ02846 1103 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 PPP3CAQ08209 521 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 CCNI2Q6ZMN8 369 aaPredicted RBP11.89□□□□□ -0.51
DDX56-203ENST00000421223 SEPT14Q6ZU15 432 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 CBWD2Q8IUF1 395 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 SELENOOQ9BVL4 669 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
DDX56-203ENST00000421223 PCNTO95613 3336 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 DENND3A2RUS2 1198 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 F8VZ95 297 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 RBAK-RBAKDNI3L0D1 243 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 FERP16591 822 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 CYP2C19P33261 490 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 GUCY2FP51841 1108 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 MAP3K10Q02779 954 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 CETN1Q12798 172 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 MTERF2Q49AM1 385 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 WDR93Q6P2C0 686 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 B3GNT9Q6UX72 402 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 PALB2Q86YC2 1186 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 XXYLT1Q8NBI6 393 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 BORCS6Q96GS4 357 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 AS3MTQ9HBK9 375 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 EPB41L5Q9HCM4 733 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 TAS2R14Q9NYV8 317 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 ADAM21Q9UKJ8 722 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 ANKRD63C9JTQ0 380 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 BCRP11274 1271 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 MCM3P25205 808 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 CCND2P30279 289 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 SMTNP53814 917 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms