RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 BCAR1P56945 870 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 LRCH2Q5VUJ6 765 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 RDM1Q8NG50 284 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 RSPH1Q8WYR4 309 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 RIPOR3Q96MK2 946 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 NIFKQ9BYG3 293 aaKnown RBP19■□□□□ 0.63
UPF3AP3-201ENST00000420996 AGXT2Q9BYV1 514 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 GCOM2Q9BZD3 368 aaPredicted RBP19■□□□□ 0.63
UPF3AP3-201ENST00000420996 UNC45AQ9H3U1 944 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 POMKQ9H5K3 350 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 TSHZ2Q9NRE2 1034 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 CARNS1A5YM72 827 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 NT5C1B-RDH14C9J2C7 533 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 CHMP2AO43633 222 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 CSDE1O75534 798 aaKnown RBP18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 IFNAR1P17181 557 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 MTHFRP42898 656 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 NUBP1P53384 320 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 UBALD2Q8IYN6 164 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 KREMEN2Q8NCW0 462 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 TMEM169Q96HH4 297 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 TRAIPQ9BWF2 469 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 SLC26A6Q9BXS9 759 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 SH3GLB2Q9NR46 395 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 VPS54Q9P1Q0 977 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 CDH22Q9UJ99 828 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
UPF3AP3-201ENST00000420996 IGKV6-21A0A0C4DH24 114 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 ST18O60284 1047 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 PSMD10O75832 226 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 PHKA2P46019 1235 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 DNM2P50570 870 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 DRP2Q13474 957 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 XKR3Q5GH77 459 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 CENPQQ7L2Z9 268 aaPredicted RBP18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 MIER3Q7Z3K6 550 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 VPS52Q8N1B4 723 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 CEP89Q96ST8 783 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 C22orf23Q9BZE7 217 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 SEPT9Q9UHD8 586 aaPredicted RBP18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 SORCS3Q9UPU3 1222 aa18.98■□□□□ 0.63
UPF3AP3-201ENST00000420996 C2CD4DB7Z1M9 353 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 STBD1O95210 358 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 PDGFBP01127 241 aaPredicted RBP18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 SKIP12755 728 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 RPS6KB1P23443 525 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 HSPA4P34932 840 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 CA8P35219 290 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 POLGP54098 1239 aaPredicted RBP18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 NLRP5P59047 1200 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 MTMR3Q13615 1198 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 MTERF2Q49AM1 385 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 Q4G0T1 1027 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 TBCKQ8TEA7 893 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 GJA10Q969M2 543 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 INO80BQ9C086 356 aaPredicted RBP18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 ZBP1Q9H171 429 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 DZANK1Q9NVP4 752 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 IRAK3Q9Y616 596 aa18.97■□□□□ 0.63
UPF3AP3-201ENST00000420996 CYP3A7-CYP3A51PA0A087WV96 503 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 A0A087WZ62 844 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 ZC3H11AO75152 810 aaKnown RBP eCLIP18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 SFPQP23246 707 aaKnown RBP eCLIP18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 CYP3A7P24462 503 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 PDIA3P30101 505 aaKnown RBP18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 EVCP57679 992 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 GIT2Q14161 759 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 B3GNT9Q6UX72 402 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 DDX53Q86TM3 631 aaKnown RBP18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 ZNF410Q86VK4 478 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 TMEM87AQ8NBN3 555 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 FDXACB1Q9BRP7 624 aaPredicted RBP18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 FAM86C1Q9NVL1 165 aa18.96■□□□□ 0.63
UPF3AP3-201ENST00000420996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 TMEM150BA6NC51 233 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 ZNF623O75123 536 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 BRD1O95696 1058 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 CTSAP10619 480 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 NOMO2Q5JPE7 1267 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 RARS2Q5T160 578 aaKnown RBP18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 GLB1LQ6UWU2 654 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 TMEM173Q86WV6 379 aaPredicted RBP18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 ZDHHC14Q8IZN3 488 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 ATOH1Q92858 354 aaPredicted RBP18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 LPPQ93052 612 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 IGSF21Q96ID5 467 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 NRDE2Q9H7Z3 1164 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 NCOA5Q9HCD5 579 aaKnown RBP18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 FAM105AQ9NUU6 356 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 SUCLA2Q9P2R7 463 aaPredicted RBP18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 PCDHA4Q9UN74 947 aa18.95■□□□□ 0.62
UPF3AP3-201ENST00000420996 DDX11L8A8MPP1 907 aa18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 GFRA3O60609 400 aa18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 MAFO75444 373 aaPredicted RBP18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 GALTP07902 379 aa18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 WEE2P0C1S8 567 aa18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 PSMA5P28066 241 aa18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 RAB27AP51159 221 aa18.94■□□□□ 0.62
UPF3AP3-201ENST00000420996 CCT2P78371 535 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms