RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 ATP6V1G3Q96LB4 118 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 UNC45AQ9H3U1 944 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 ZHX3Q9H4I2 956 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 SLC40A1Q9NP59 571 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 GDF3Q9NR23 364 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 FBXO40Q9UH90 709 aa16.1■□□□□ 0.17
SEMA4D-204ENST00000420101 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 RNF225M0QZC1 329 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 PSMA7O14818 248 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 SRGAP2O75044 1071 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 CELF2O95319 508 aaKnown RBP16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 NR3C2P08235 984 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 HNRNPH3P31942 346 aaKnown RBP16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 C2orf54Q08AI8 447 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 MIER3Q7Z3K6 550 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 NLRX1Q86UT6 975 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 C2orf69Q8N8R5 385 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 ARL8AQ96BM9 186 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 ZIM3Q96PE6 472 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 RIT2Q99578 217 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 POLR3CQ9BUI4 534 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 SPATC1LQ9H0A9 340 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 GBA2Q9HCG7 927 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 SLC39A2Q9NP94 309 aa16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 MAGEC2Q9UBF1 373 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-204ENST00000420101 LCA5LO95447 670 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 SPATA31C1P0DKV0 1188 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 FCER1AP12319 257 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 WDR78Q5VTH9 848 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 C8orf74Q6P047 294 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 RIOX2Q8IUF8 465 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 MAB21L3Q8N8X9 362 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 CCDC114Q96M63 670 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 LRRC1Q9BTT6 524 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 TTYH3Q9C0H2 523 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 TRIM10Q9UDY6 481 aa16.08■□□□□ 0.17
SEMA4D-204ENST00000420101 FRMPD4Q14CM0 1322 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 GRID2IPA4D2P6 1211 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 GOLGA6L10A6NI86 522 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 ZMYND10O75800 440 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 GJA5P36382 358 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 PSMC6P62333 389 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 EPHA7Q15375 998 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 C11orf91Q3C1V1 193 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 RNF187Q5TA31 235 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 CCDC65Q8IXS2 484 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 ADSSL1Q8N142 457 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 HPS3Q969F9 1004 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 RNPC3Q96LT9 517 aaKnown RBP16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 GDAP1L1Q96MZ0 367 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 TRIM6Q9C030 488 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 TBC1D22BQ9NU19 505 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 PANK4Q9NVE7 773 aa16.08■□□□□ 0.16
SEMA4D-204ENST00000420101 STK4Q13043 487 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 XRCC4Q13426 336 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 BIRC3Q13489 604 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 CYB5D1Q6P9G0 228 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 TRIM47Q96LD4 638 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 OSBPL9Q96SU4 736 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 CD248Q9HCU0 757 aa16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 DMGDHQ9UI17 866 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-204ENST00000420101 COL11A1P12107 1806 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 NPHP3-ACAD11A0A0J9YXS1 232 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 C5orf60A6NFR6 353 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 PJA2O43164 708 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 DNAJC8O75937 253 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 CRELD2Q6UXH1 353 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 RUFY4Q6ZNE9 571 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 VSIG10LQ86VR7 867 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 PFASO15067 1338 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 PARP14Q460N5 1801 aa16.06■□□□□ 0.16
SEMA4D-204ENST00000420101 TRIM49BA6NDI0 452 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 SLITRK3O94933 977 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 EYA4O95677 639 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 PAEPP09466 180 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 CYP11B2P19099 503 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 FKBP1BP68106 108 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 COASYQ13057 564 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 PSMD2Q13200 908 aa16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 SYT2Q8N9I0 419 aaPredicted RBP16.05■□□□□ 0.16
SEMA4D-204ENST00000420101 TSEN2Q8NCE0 465 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms