RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 TBKBP1A7MCY6 615 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 LAD1O00515 517 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 ZBTB39O15060 712 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 HOXA2O43364 376 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 DGAT1O75907 488 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 RB1P06400 928 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 BMPR1AP36894 532 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 RARRES1P49788 294 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 GATMP50440 423 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 LAMTOR4Q0VGL1 99 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 SPOUT1Q5T280 376 aaKnown RBP14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 CATSPER4Q7RTX7 472 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 ABI1Q8IZP0 508 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 RNF169Q8NCN4 708 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 PIGOQ8TEQ8 1089 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 ATXN2LQ8WWM7 1075 aaKnown RBP14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 MRPL38Q96DV4 380 aaKnown RBP14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 PCDHB6Q9Y5E3 794 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 GTF3C3Q9Y5Q9 886 aa14.18□□□□□ -0.14
HMGN1P4-201ENST00000419500 ASAP2O43150 1006 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 SRGAP2CP0DJJ0 459 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 FGFR1P11362 822 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 PHKA2P46019 1235 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 PTGDRQ13258 359 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 MXD4Q14582 209 aaPredicted RBP14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 TIGD5Q53EQ6 642 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 RILPL1Q5EBL4 403 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 FAM102BQ5T8I3 360 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 FERMT3Q86UX7 667 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 CATSPER3Q86XQ3 398 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 RNF149Q8NC42 400 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
HMGN1P4-201ENST00000419500 KIAA1671Q9BY89 1806 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 USO1O60763 962 aaKnown RBP14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 MED24O75448 989 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 LINC00271P0C7V0 271 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 SPATA31C1P0DKV0 1188 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 RPA1P27694 616 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 TOB1P50616 345 aaPredicted RBP14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 TFDP1Q14186 410 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 AAK1Q2M2I8 961 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 TJAP1Q5JTD0 557 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 LARP1BQ659C4 914 aaKnown RBP14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 SRGAP1Q7Z6B7 1085 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 ECHDC2Q86YB7 292 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 P2RX5Q93086 422 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 NACC1Q96RE7 527 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 IFT122Q9HBG6 1241 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 AAASQ9NRG9 546 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 PRRC2BQ5JSZ5 2229 aaKnown RBP14.16□□□□□ -0.14
HMGN1P4-201ENST00000419500 A0A0U1RQF3 1178 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 DLL1O00548 723 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 ERLIN2O94905 339 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 CSPG5O95196 566 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 SKIP12755 728 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 MUTP22033 750 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 CCT6AP40227 531 aaKnown RBP14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 FAM189BP81408 668 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 MRPS5P82675 430 aaKnown RBP14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 SNX29Q8TEQ0 813 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 HLA-CQ95604 372 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 TMEM117Q9H0C3 514 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 LMAN2LQ9H0V9 348 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 XPNPEP1Q9NQW7 623 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 DBR1Q9UK59 544 aaKnown RBP14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 COG5Q9UP83 839 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 PCDHB12Q9Y5F1 795 aa14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 SPTBN5Q9NRC6 3674 aaKnown RBP14.15□□□□□ -0.14
HMGN1P4-201ENST00000419500 FNDC1Q4ZHG4 1894 aaPredicted RBP14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 ARHGEF35A5YM69 484 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 GRM6O15303 877 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 EOMESO95936 686 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 PDCP20941 246 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 PRPHP41219 470 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 RAB27AP51159 221 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 NCBP1Q09161 790 aaKnown RBP14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 CUL4AQ13619 759 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 PDIA5Q14554 519 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 DTHD1Q6ZMT9 781 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 LRRC43Q8N309 656 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 MCPH1Q8NEM0 835 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 ASB2Q96Q27 587 aa14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 POLR3FQ9H1D9 316 aaPredicted RBP14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 ALG13Q9NP73 1137 aaKnown RBP14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.14□□□□□ -0.15
HMGN1P4-201ENST00000419500 A0A087WWV3 80 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms