RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 AP3B2Q13367 1082 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 SERINC3Q13530 473 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 ZYXQ15942 572 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 CWF19L2Q2TBE0 894 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 N4BP2L1Q5TBK1 243 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 FAM117BQ6P1L5 589 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 CCDC81Q6ZN84 652 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 REC114Q7Z4M0 266 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 CKAP2LQ8IYA6 745 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 TMEFF1Q8IYR6 380 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 SLC7A3Q8WY07 619 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 OSBPL2Q9H1P3 480 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 TRMT13Q9NUP7 481 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 HERC5Q9UII4 1024 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 GRIN2DO15399 1336 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 RAD50Q92878 1312 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 OTOGLQ3ZCN5 2332 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 ASPMQ8IZT6 3477 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 M0R082 166 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CTAGE5O15320 804 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ADCY6O43306 1168 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 KLF4O43474 513 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 OFD1O75665 1012 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 PGK2P07205 417 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CDK8P49336 464 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 NKX3-2P78367 333 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 IRX6P78412 446 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 BEX3Q00994 111 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CLCQ05315 142 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 C19orf57Q0VDD7 668 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 SCN5AQ14524 2016 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ZNF792Q3KQV3 632 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 SCARA3Q6AZY7 606 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CNKSR3Q6P9H4 555 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CTR9Q6PD62 1173 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ANKS3Q6ZW76 656 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 MSL3Q8N5Y2 521 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 GPATCH11Q8N954 259 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ZNF417Q8TAU3 575 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ZCCHC14Q8WYQ9 949 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 WNT8BQ93098 351 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 PPP2R3CQ969Q6 453 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 BTBD6Q96KE9 485 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ZNF587Q96SQ5 575 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 MMP19Q99542 508 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 LMAN2LQ9H0V9 348 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 CLEC1BQ9P126 229 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 POLR3KQ9Y2Y1 108 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 WDR87Q6ZQQ6 2873 aa6.46□□□□□ -1.38
ECHDC1-206ENST00000417628 ABHD14A-ACY1A0A1B0GW23 586 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 CCDC66A2RUB6 948 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 FSCN2O14926 492 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 ZEB2O60315 1214 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 LILRB5O75023 590 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 EFCAB14O75071 495 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 CTSBP07858 339 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 SP9P0CG40 484 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 MCM4P33991 863 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 USP14P54578 494 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 CASP7P55210 303 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 ANAPC15P60006 121 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 PSMC6P62333 389 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 SATB1Q01826 763 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 PLS1Q14651 629 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 CCDC57Q2TAC2 916 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 LRRFIP1Q32MZ4 808 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 LARP1BQ659C4 914 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 CHSY3Q70JA7 882 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 REXO1Q8N1G1 1221 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 MB21D1Q8N884 522 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 GALNT6Q8NCL4 622 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 SUSD6Q92537 303 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 KCNB2Q92953 911 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 SMOC2Q9H3U7 446 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 RPAP3Q9H6T3 665 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 OSGEPQ9NPF4 335 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 RBM28Q9NW13 759 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 ZBTB21Q9ULJ3 1066 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 BARX2Q9UMQ3 279 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 SMCHD1A6NHR9 2005 aa6.45□□□□□ -1.38
ECHDC1-206ENST00000417628 SHISA8B8ZZ34 492 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 OIP5O43482 229 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 GDF11O95390 407 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 SNAI1O95863 264 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 ARP10275 920 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 SP100P23497 879 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 BTDP43251 543 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 GIPRP48546 466 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 ZNF165P49910 485 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms