RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DGLUCYQ7Z3D6 616 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 TMC7Q7Z402 723 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 MRPL43Q8N983 215 aaKnown RBP20.29■□□□□ 0.84
VCP-202ENST00000417448 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 CASD1Q96PB1 797 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 ATP6V0A4Q9HBG4 840 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 FANCMQ8IYD8 2048 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 ESYT2A0FGR8 921 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 NPY5RQ15761 445 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 KIAA1841Q6NSI8 718 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 FAM228AQ86W67 206 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 DTWD2Q8NBA8 298 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 CYP2W1Q8TAV3 490 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 CCDC12Q8WUD4 166 aaPredicted RBP20.28■□□□□ 0.84
VCP-202ENST00000417448 AZI2Q9H6S1 392 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 SH3GLB2Q9NR46 395 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
VCP-202ENST00000417448 EOMESO95936 686 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 DSC3Q14574 896 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 SMC1AQ14683 1233 aaKnown RBP20.27■□□□□ 0.84
VCP-202ENST00000417448 PLPPR4Q7Z2D5 763 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 KIAA2013Q8IYS2 634 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 KIAA0319LQ8IZA0 1049 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 REXO1Q8N1G1 1221 aaKnown RBP20.27■□□□□ 0.84
VCP-202ENST00000417448 CCDC148Q8NFR7 591 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 OXER1Q8TDS5 423 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 ZNF558Q96NG5 402 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 PPP1R16BQ96T49 567 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 TMEM117Q9H0C3 514 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 ELAC1Q9H777 363 aaKnown RBP20.27■□□□□ 0.84
VCP-202ENST00000417448 JADE2Q9NQC1 790 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 SH2B1Q9NRF2 756 aaPredicted RBP20.27■□□□□ 0.84
VCP-202ENST00000417448 USTQ9Y2C2 406 aa20.27■□□□□ 0.84
VCP-202ENST00000417448 ACACBO00763 2458 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 KLRC1P26715 233 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 GNA11P29992 359 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 PPM1AP35813 382 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 STAT5BP51692 787 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 ACTR2P61160 394 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 BLIDQ8IZY5 108 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
VCP-202ENST00000417448 DBR1Q9UK59 544 aaKnown RBP20.26■□□□□ 0.83
VCP-202ENST00000417448 PCDHA4Q9UN74 947 aa20.26■□□□□ 0.83
VCP-202ENST00000417448 LMNAP02545 664 aaKnown RBP20.25■□□□□ 0.83
VCP-202ENST00000417448 KRT17Q04695 432 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 KIZQ2M2Z5 673 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 FAM43BQ6ZT52 329 aaPredicted RBP20.25■□□□□ 0.83
VCP-202ENST00000417448 SLC39A11Q8N1S5 342 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 LRRC43Q8N309 656 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 PLCD3Q8N3E9 789 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 OSMRQ99650 979 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 PHF20Q9BVI0 1012 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 SPG21Q9NZD8 308 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 R4GN57 208 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 SPTBN2O15020 2390 aa20.25■□□□□ 0.83
VCP-202ENST00000417448 GPR182O15218 404 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 MAFGO15525 162 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 EDIL3O43854 480 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 FOSP01100 380 aaPredicted RBP20.24■□□□□ 0.83
VCP-202ENST00000417448 EPCAMP16422 314 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 KCNG4Q8TDN1 519 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 TNPO1Q92973 898 aaKnown RBP20.24■□□□□ 0.83
VCP-202ENST00000417448 CNTNAP3BQ96NU0 1288 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 CNTNAP3Q9BZ76 1288 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 CYP26B1Q9NR63 512 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 KCNH7Q9NS40 1196 aa20.24■□□□□ 0.83
VCP-202ENST00000417448 FAM205CA6NFA0 338 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 ZBTB42B2RXF5 422 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 SREBF1P36956 1147 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 AP3B2Q13367 1082 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 EARS2Q5JPH6 523 aaKnown RBP20.23■□□□□ 0.83
VCP-202ENST00000417448 CLLU1OSQ5K130 101 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 ATAT1Q5SQI0 421 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 SIX5Q8N196 739 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 AUTS2Q8WXX7 1259 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 WASF1Q92558 559 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 RTP3Q9BQQ7 232 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 LLPHQ9BRT6 129 aaKnown RBP20.23■□□□□ 0.83
VCP-202ENST00000417448 DUSP12Q9UNI6 340 aa20.23■□□□□ 0.83
VCP-202ENST00000417448 M0R2N6 131 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 ATG7O95352 703 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 CA8P35219 290 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 ZNF76P36508 570 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 NR5A1Q13285 461 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 ITGB3BPQ13352 177 aaPredicted RBP20.22■□□□□ 0.83
VCP-202ENST00000417448 TDGQ13569 410 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 PUM1Q14671 1186 aaKnown RBP eCLIP20.22■□□□□ 0.836e-6■■■■□ 21
VCP-202ENST00000417448 ODR4Q5SWX8 454 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 MXRA8Q9BRK3 442 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 DZANK1Q9NVP4 752 aa20.22■□□□□ 0.83
VCP-202ENST00000417448 GPR179Q6PRD1 2367 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 IGKV6D-21A0A0A0MT36 114 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 NT5C1B-RDH14C9J2C7 533 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 NARSO43776 548 aaKnown RBP20.21■□□□□ 0.83
VCP-202ENST00000417448 GPR32O75388 356 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 CRYBB1P53674 252 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms