RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TECP42680 631 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 ANKRD54Q6NXT1 300 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 SYCE2Q6PIF2 218 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 TRIM67Q6ZTA4 783 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 TMC7Q7Z402 723 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 BMP8AQ7Z5Y6 402 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 ALYREFQ86V81 257 aaKnown RBP16.67■□□□□ 0.26
RPS28-201ENST00000417088 SLC39A11Q8N1S5 342 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 HELQQ8TDG4 1101 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
RPS28-201ENST00000417088 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 CYP46A1Q9Y6A2 500 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 A0A087WZ62 844 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 SRGAP2BP0DMP2 458 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 ZXDAP98168 799 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 CDC42EP1Q00587 391 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 NHLH1Q02575 133 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 GALNT17Q6IS24 598 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 FDXACB1Q9BRP7 624 aaPredicted RBP16.66■□□□□ 0.26
RPS28-201ENST00000417088 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
RPS28-201ENST00000417088 WDFY4Q6ZS81 3184 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 TMEM221A6NGB7 291 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 NT5C1B-RDH14C9J2C7 533 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 M0R296 226 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 DNM2P50570 870 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 STK3Q13188 491 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 NONOQ15233 471 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPS28-201ENST00000417088 INF2Q27J81 1249 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 ANO5Q75V66 913 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
RPS28-201ENST00000417088 MRPL43Q8N983 215 aaKnown RBP16.65■□□□□ 0.26
RPS28-201ENST00000417088 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 APOL5Q9BWW9 433 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
RPS28-201ENST00000417088 DDX25Q9UHL0 483 aaKnown RBP16.65■□□□□ 0.26
RPS28-201ENST00000417088 ZDBF2Q9HCK1 2354 aa16.65■□□□□ 0.26
RPS28-201ENST00000417088 C2orf71A6NGG8 1288 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 EML1O00423 815 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 SLC37A4O43826 429 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 MAFO75444 373 aaPredicted RBP16.64■□□□□ 0.25
RPS28-201ENST00000417088 HOXB8P17481 243 aaPredicted RBP16.64■□□□□ 0.25
RPS28-201ENST00000417088 SFPQP23246 707 aaKnown RBP eCLIP16.64■□□□□ 0.25
RPS28-201ENST00000417088 PHKA2P46019 1235 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 BCAR1P56945 870 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 PSMC5P62195 406 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 CPLX2Q6PUV4 134 aaKnown RBP16.64■□□□□ 0.25
RPS28-201ENST00000417088 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 PBXIP1Q96AQ6 731 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 MRPL9Q9BYD2 267 aaKnown RBP16.64■□□□□ 0.25
RPS28-201ENST00000417088 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
RPS28-201ENST00000417088 ALDH7A1P49419 539 aaKnown RBP16.63■□□□□ 0.25
RPS28-201ENST00000417088 SMC1AQ14683 1233 aaKnown RBP16.63■□□□□ 0.25
RPS28-201ENST00000417088 LETM2Q2VYF4 491 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 PLA2G4FQ68DD2 849 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
RPS28-201ENST00000417088 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 KSR1Q8IVT5 923 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 CASP10Q92851 521 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 LPPQ93052 612 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 INO80BQ9C086 356 aaPredicted RBP16.63■□□□□ 0.25
RPS28-201ENST00000417088 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 PIN4Q9Y237 131 aaKnown RBP16.63■□□□□ 0.25
RPS28-201ENST00000417088 HCFC2Q9Y5Z7 792 aa16.63■□□□□ 0.25
RPS28-201ENST00000417088 CLASP2O75122 1294 aaKnown RBP16.62■□□□□ 0.25
RPS28-201ENST00000417088 QARSP47897 775 aaKnown RBP16.62■□□□□ 0.25
RPS28-201ENST00000417088 MRE11P49959 708 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 NPEPPSP55786 919 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 SIGLEC14Q08ET2 396 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 PPP2R5CQ13362 524 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 LONRF3Q496Y0 759 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 TMEM173Q86WV6 379 aaPredicted RBP16.62■□□□□ 0.25
RPS28-201ENST00000417088 RSPH1Q8WYR4 309 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 TMEM169Q96HH4 297 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 FAM20AQ96MK3 541 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 NLRP4Q96MN2 994 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 KCNMB3Q9NPA1 279 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 CYP26B1Q9NR63 512 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 CDH22Q9UJ99 828 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 VAV3Q9UKW4 847 aa16.62■□□□□ 0.25
RPS28-201ENST00000417088 MEIS3P2A8K0S8 358 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 ZNF623O75123 536 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 ZC3H11AO75152 810 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPS28-201ENST00000417088 CXCL14O95715 111 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 SKIP12755 728 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 SCRN1Q12765 414 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 PTPN21Q16825 1174 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 IER5LQ5T953 404 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 PPP4R3AQ6IN85 833 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 VPS52Q8N1B4 723 aa16.61■□□□□ 0.25
RPS28-201ENST00000417088 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
RPS28-201ENST00000417088 ASIC4Q96FT7 647 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms