RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CHST12Q9NRB3 414 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 PLXNA4Q9HCM2 1894 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 A0A087WZ62 844 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 HIDE1A8MVS5 230 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 CDKL5O76039 1030 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 STBD1O95210 358 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 TECP42680 631 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 PSMC5P62195 406 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 CBX2Q14781 532 aaPredicted RBP16.21■□□□□ 0.19
PAF1-202ENST00000416728 INF2Q27J81 1249 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 TMEM184AQ6ZMB5 413 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 ZNF410Q86VK4 478 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 SUSD6Q92537 303 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 MFSD14AQ96MC6 490 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 FDXACB1Q9BRP7 624 aaPredicted RBP16.21■□□□□ 0.19
PAF1-202ENST00000416728 INO80BQ9C086 356 aaPredicted RBP16.21■□□□□ 0.19
PAF1-202ENST00000416728 KCNH6Q9H252 994 aa16.21■□□□□ 0.19
PAF1-202ENST00000416728 SUCLA2Q9P2R7 463 aaPredicted RBP16.21■□□□□ 0.19
PAF1-202ENST00000416728 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 SLC37A4O43826 429 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
PAF1-202ENST00000416728 KCNC3Q14003 757 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 LETM2Q2VYF4 491 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 TWF2Q6IBS0 349 aaKnown RBP16.2■□□□□ 0.18
PAF1-202ENST00000416728 ANKRD54Q6NXT1 300 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 LLGL2Q6P1M3 1020 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 RHPN2Q8IUC4 686 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
PAF1-202ENST00000416728 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 PIN4Q9Y237 131 aaKnown RBP16.2■□□□□ 0.18
PAF1-202ENST00000416728 MUC6Q6W4X9 2439 aa16.2■□□□□ 0.18
PAF1-202ENST00000416728 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
PAF1-202ENST00000416728 XBP1P17861 261 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 PHKA2P46019 1235 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 SMC1AQ14683 1233 aaKnown RBP16.19■□□□□ 0.18
PAF1-202ENST00000416728 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
PAF1-202ENST00000416728 PLA2G4FQ68DD2 849 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 ANO5Q75V66 913 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 RSPH1Q8WYR4 309 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 FAM20AQ96MK3 541 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 NLRP4Q96MN2 994 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 TRAIPQ9BWF2 469 aa16.19■□□□□ 0.18
PAF1-202ENST00000416728 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
PAF1-202ENST00000416728 EML1O00423 815 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 DKC1O60832 514 aaKnown RBP eCLIP16.18■□□□□ 0.18
PAF1-202ENST00000416728 SKIP12755 728 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 GCFC2P16383 781 aaKnown RBP16.18■□□□□ 0.18
PAF1-202ENST00000416728 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
PAF1-202ENST00000416728 CA8P35219 290 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 QARSP47897 775 aaKnown RBP16.18■□□□□ 0.18
PAF1-202ENST00000416728 BCAR1P56945 870 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 PPP2R5CQ13362 524 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 SYCE2Q6PIF2 218 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 TRIM67Q6ZTA4 783 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 CATSPER4Q7RTX7 472 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 NEK8Q86SG6 692 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 MRPL43Q8N983 215 aaKnown RBP16.18■□□□□ 0.18
PAF1-202ENST00000416728 SLC7A3Q8WY07 619 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 CASP10Q92851 521 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 TMEM169Q96HH4 297 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 FBXL18Q96ME1 805 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 PHF20Q9BVI0 1012 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 APOL5Q9BWW9 433 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 S1PR5Q9H228 398 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 KCNMB3Q9NPA1 279 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 CYP26B1Q9NR63 512 aa16.18■□□□□ 0.18
PAF1-202ENST00000416728 TMEM221A6NGB7 291 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 C2orf71A6NGG8 1288 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 NT5C1B-RDH14C9J2C7 533 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 M0R296 226 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 ZC3H11AO75152 810 aaKnown RBP eCLIP16.17■□□□□ 0.18
PAF1-202ENST00000416728 RAB27AP51159 221 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 ZXDAP98168 799 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 SCRN1Q12765 414 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 PPP4R3AQ6IN85 833 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 BMP8AQ7Z5Y6 402 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 KSR1Q8IVT5 923 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 LPPQ93052 612 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 FAM105AQ9NUU6 356 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 VAV3Q9UKW4 847 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 HCFC2Q9Y5Z7 792 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 C5orf42Q9H799 3197 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 STK36Q9NRP7 1315 aa16.17■□□□□ 0.18
PAF1-202ENST00000416728 CARNS1A5YM72 827 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 MARCH6O60337 910 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 CCNT1O60563 726 aaKnown RBP16.16■□□□□ 0.18
PAF1-202ENST00000416728 P4HBP07237 508 aaKnown RBP16.16■□□□□ 0.18
PAF1-202ENST00000416728 POLGP54098 1239 aaPredicted RBP16.16■□□□□ 0.18
PAF1-202ENST00000416728 NPEPPSP55786 919 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 LONRF3Q496Y0 759 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 ALYREFQ86V81 257 aaKnown RBP16.16■□□□□ 0.18
PAF1-202ENST00000416728 EXOC8Q8IYI6 725 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 PBXIP1Q96AQ6 731 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms