RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 DYNLT1P63172 113 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 FAM83AQ86UY5 434 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 SGMS1Q86VZ5 419 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 OXER1Q8TDS5 423 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 FBXO28Q9NVF7 368 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 POTEB3A0JP26 581 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 POTECB2RU33 542 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 PDHBP11177 359 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 ACTN1P12814 892 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 POTEBQ6S5H4 581 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 BBS5Q8N3I7 341 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 C3P01024 1663 aa16.77■□□□□ 0.27
PHRF1-203ENST00000416188 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 MED7O43513 233 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 CASP1P29466 404 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 DGKDQ16760 1214 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 SH2D4BQ5SQS7 431 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 SRBD1Q8N5C6 995 aaKnown RBP16.76■□□□□ 0.27
PHRF1-203ENST00000416188 MIPOL1Q8TD10 442 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 TCP11X2Q5H9J9 407 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 CPSF3Q9UKF6 684 aaKnown RBP16.76■□□□□ 0.27
PHRF1-203ENST00000416188 HIP1RO75146 1068 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 CCNYQ8ND76 341 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 MROH8Q9H579 483 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 JRKLQ9Y4A0 524 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 DNAJC24Q6P3W2 148 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 BCAP29Q9UHQ4 241 aa16.76■□□□□ 0.27
PHRF1-203ENST00000416188 CLTAP09496 248 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
PHRF1-203ENST00000416188 CALN1Q9BXU9 219 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 MRPL4Q9BYD3 311 aaKnown RBP16.75■□□□□ 0.27
PHRF1-203ENST00000416188 SMYD2Q9NRG4 433 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 ECEL1O95672 775 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 BAG2O95816 211 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 SERPING1P05155 500 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 EPHA7Q15375 998 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 DCLK2Q8N568 766 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 PCDHA13Q9Y5I0 950 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 KRT1P04264 644 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 ATN1P54259 1190 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-203ENST00000416188 CDC42EP1Q00587 391 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 LRRC63Q05C16 580 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 POTEEQ6S8J3 1075 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 CFAP61Q8NHU2 1237 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 GANCQ8TET4 914 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 EPB41L4AQ9HCS5 686 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-203ENST00000416188 SLC8A2Q9UPR5 921 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 ZNF609O15014 1411 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 CHGBP05060 677 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 DHX9Q08211 1270 aaKnown RBP16.75■□□□□ 0.27
PHRF1-203ENST00000416188 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
PHRF1-203ENST00000416188 SUCLA2Q9P2R7 463 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-203ENST00000416188 CAPN15O75808 1086 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 SEPT6Q14141 434 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 ZKSCAN8Q15776 578 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 RESP18Q5W5W9 173 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 SFR1Q86XK3 245 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 SLC4A9Q96Q91 983 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 SLC38A10Q9HBR0 1119 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 CXCL11O14625 94 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 PLCB4Q15147 1175 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 PHLDB3Q6NSJ2 640 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 TTC30AQ86WT1 665 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 EIF2AK1Q9BQI3 630 aaKnown RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 MRPL47Q9HD33 250 aaKnown RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 DDTLA6NHG4 134 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 MUM1Q2TAK8 710 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 OR6B2Q6IFH4 312 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 ALKBH5Q6P6C2 394 aaKnown RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 RAB3IPQ96QF0 476 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 PANX2Q96RD6 677 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 PARD6BQ9BYG5 372 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 CPB1P15086 417 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 GARSP41250 739 aaKnown RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 ORC2Q13416 577 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-203ENST00000416188 FAN1Q9Y2M0 1017 aa16.74■□□□□ 0.27
PHRF1-203ENST00000416188 RPS6KA5O75582 802 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 CYP2C9P11712 490 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 SLCO1A2P46721 670 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 IL9RQ01113 521 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 LAMC2Q13753 1193 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 MCUQ8NE86 351 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 ANAPC5Q9UJX4 755 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 SESN3P58005 492 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 TRIP13Q15645 432 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-203ENST00000416188 BASP1P80723 227 aaKnown RBP16.73■□□□□ 0.27
PHRF1-203ENST00000416188 TMEM62Q0P6H9 643 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 FAM213AQ9BRX8 229 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms