RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 DRC1Q96MC2 740 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
RFFL-205ENST00000415395 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 RSPH10B2B2RC85 870 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 EIF3CLB5ME19 914 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 GNA14O95837 355 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 RSPH10BP0C881 870 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 CAPN2P17655 700 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 VSNL1P62760 191 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 ZBED6P86452 979 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 SREBF2Q12772 1141 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 MEA1Q16626 185 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 MAMDC4Q6UXC1 1216 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 GPR142Q7Z601 462 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 ZC3H3Q8IXZ2 948 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 CAGE1Q8TC20 777 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 VTA1Q9NP79 307 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 SLC5A4Q9NY91 659 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 LARSQ9P2J5 1176 aaKnown RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 PPME1Q9Y570 386 aa12.66□□□□□ -0.38
RFFL-205ENST00000415395 MAFBQ9Y5Q3 323 aaPredicted RBP12.66□□□□□ -0.38
RFFL-205ENST00000415395 A0A1W2PQJ5 194 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 PDXKO00764 312 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 HIP1RO75146 1068 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 AARSP49588 968 aaKnown RBP eCLIP12.65□□□□□ -0.38
RFFL-205ENST00000415395 MAPK7Q13164 816 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 IRF5Q13568 498 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 LRRC41Q15345 812 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 SPA17Q15506 151 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 NFIL3Q16649 462 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 XKR9Q5GH70 373 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 XKR3Q5GH77 459 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 SWSAP1Q6NVH7 229 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 CCDC60Q8IWA6 550 aaPredicted RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 FAM178BQ8IXR5 827 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 MYCT1Q8N699 235 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 GLIS3Q8NEA6 775 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 AFAP1L1Q8TED9 768 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 SEPT1Q8WYJ6 367 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 C17orf75Q9HAS0 396 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TRAF3IP3Q9Y228 551 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 IGF2BP3O00425 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
RFFL-205ENST00000415395 BACH1O14867 736 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 ZNF862O60290 1169 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 COBLO75128 1261 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 STBD1O95210 358 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 GCNT3O95395 438 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 GGPS1O95749 300 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 PRKCEQ02156 737 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 KIF5AQ12840 1032 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TAF1CQ15572 869 aaPredicted RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 ANO5Q75V66 913 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 MCPH1Q8NEM0 835 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 CRACR2AQ9BSW2 395 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 FGFBP2Q9BYJ0 223 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 FAM107BQ9H098 131 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 ST6GALNAC4Q9H4F1 302 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
RFFL-205ENST00000415395 KCNG1Q9UIX4 513 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
RFFL-205ENST00000415395 RBM47A0AV96 593 aaKnown RBP12.64□□□□□ -0.39
RFFL-205ENST00000415395 KIF3CO14782 793 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 DGAT1O75907 488 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 PLS3P13797 630 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 TNNT3P45378 269 aaPredicted RBP12.64□□□□□ -0.39
RFFL-205ENST00000415395 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
RFFL-205ENST00000415395 RTP1P59025 263 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 ITIH3Q06033 890 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 ODR4Q5SWX8 454 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 ZNF720Q7Z2F6 126 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 DAW1Q8N136 415 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 KIFAP3Q92845 792 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 PCMTD1Q96MG8 357 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms