RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CABP5Q9NP86 173 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ZBTB21Q9ULJ3 1066 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 SAR1BQ9Y6B6 198 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 GREB1LQ9C091 1923 aaPredicted RBP22.03■■□□□ 1.12
AP1S3-205ENST00000415298 USP2O75604 605 aaPredicted RBP22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ME1P48163 572 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ATP11AP98196 1134 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ITGA7Q13683 1181 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 SUPT20HL1Q3ZLR7 823 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 CFAP58Q5T655 872 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 OTUD6AQ7L8S5 288 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 USP33Q8TEY7 942 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 DDX12PQ92771 950 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 WRNIP1Q96S55 665 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 NRDE2Q9H7Z3 1164 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ADAM22Q9P0K1 906 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 FBXO9Q9UK97 447 aaPredicted RBP22.03■■□□□ 1.12
AP1S3-205ENST00000415298 A0A1W2PRG0 241 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 HIP1RO75146 1068 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 TTLL1O95922 423 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 ECE1P42892 770 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 CACNA2D4Q7Z3S7 1137 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 SREK1Q8WXA9 508 aaKnown RBP22.02■■□□□ 1.12
AP1S3-205ENST00000415298 MAML3Q96JK9 1138 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 ZMAT2Q96NC0 199 aaKnown RBP22.02■■□□□ 1.12
AP1S3-205ENST00000415298 IRF2BPLQ9H1B7 796 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 HESX1Q9UBX0 185 aa22.02■■□□□ 1.12
AP1S3-205ENST00000415298 TSR1Q2NL82 804 aaKnown RBP22.02■■□□□ 1.11
AP1S3-205ENST00000415298 CATIPQ7Z7H3 387 aa22.02■■□□□ 1.11
AP1S3-205ENST00000415298 LONP2Q86WA8 852 aa22.02■■□□□ 1.11
AP1S3-205ENST00000415298 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.02■■□□□ 1.11
AP1S3-205ENST00000415298 CCDC197Q8NCU1 140 aa22.02■■□□□ 1.11
AP1S3-205ENST00000415298 KLRG1Q96E93 195 aa22.02■■□□□ 1.11
AP1S3-205ENST00000415298 KANSL2Q9H9L4 492 aa22.02■■□□□ 1.11
AP1S3-205ENST00000415298 H3BQV1 296 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 WFS1O76024 890 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 GNAZP19086 355 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 IFFO2Q5TF58 517 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 CPLX4Q7Z7G2 160 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 ANKS4BQ8N8V4 417 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 FANCBQ8NB91 859 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 ACER1Q8TDN7 264 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 NOC3LQ8WTT2 800 aaKnown RBP22.01■■□□□ 1.11
AP1S3-205ENST00000415298 TIPINQ9BVW5 301 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 ZNF341Q9BYN7 854 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 EXOC1Q9NV70 894 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 STK24Q9Y6E0 443 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 BAZ2BQ9UIF8 2168 aaKnown RBP22.01■■□□□ 1.11
AP1S3-205ENST00000415298 hCG_2014768A0A024R1R8 64 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 GNA14O95837 355 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 NT5C2P49902 561 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 LACTBP83111 547 aaPredicted RBP22.01■■□□□ 1.11
AP1S3-205ENST00000415298 DCAF15Q66K64 600 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 RNF25Q96BH1 459 aaPredicted RBP22.01■■□□□ 1.11
AP1S3-205ENST00000415298 GBP5Q96PP8 586 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 HAPLN3Q96S86 360 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 ZNF180Q9UJW8 692 aa22.01■■□□□ 1.11
AP1S3-205ENST00000415298 UBE2Q2LH0YL09 131 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 RAD21O60216 631 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 KCNJ2P63252 427 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 KANK3Q6NY19 840 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 FBF1Q8TES7 1133 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 NAP1L3Q99457 506 aaPredicted RBP22■■□□□ 1.11
AP1S3-205ENST00000415298 COMMD3-BMI1R4GMX3 469 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 GOLGA8HP0CJ92 632 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 MTTPP55157 894 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 DUS1LQ6P1R4 473 aaKnown RBP22■■□□□ 1.11
AP1S3-205ENST00000415298 ZNF408Q9H9D4 720 aa22■■□□□ 1.11
AP1S3-205ENST00000415298 A0A1W2PQ27 194 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 A0A1W2PQ64 194 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 A0A1W2PQD8 194 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 PAEPP09466 180 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 CNPY1Q3B7I2 92 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 USP17L2Q6R6M4 530 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 STKLD1Q8NE28 680 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 ZNF112Q9UJU3 913 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 TIMM22Q9Y584 194 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 MYH4Q9Y623 1939 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 CTNND1O60716 968 aaKnown RBP21.99■■□□□ 1.11
AP1S3-205ENST00000415298 TCF7P36402 384 aaPredicted RBP21.99■■□□□ 1.11
AP1S3-205ENST00000415298 GUCY2FP51841 1108 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 INAQ16352 499 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 PAPD7Q5XG87 772 aaKnown RBP21.99■■□□□ 1.11
AP1S3-205ENST00000415298 PALB2Q86YC2 1186 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 PHKBQ93100 1093 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 CPVLQ9H3G5 476 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 QPCTLQ9NXS2 382 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 SLC12A6Q9UHW9 1150 aa21.99■■□□□ 1.11
AP1S3-205ENST00000415298 A0A0J9YVX5 310 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 DYTNA2CJ06 578 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 USP17L5A8MUK1 530 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 CETN3O15182 167 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 BIRC5O15392 142 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 GBP1P32455 592 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 SERPINB4P48594 390 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 SARSP49591 514 aaKnown RBP21.98■■□□□ 1.11
AP1S3-205ENST00000415298 NDUFA8P51970 172 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 RTN1Q16799 776 aa21.98■■□□□ 1.11
AP1S3-205ENST00000415298 EIF2AQ9BY44 585 aaKnown RBP21.98■■□□□ 1.11
AP1S3-205ENST00000415298 TMEM110-MUSTN1A8MSY1 372 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms