RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 METTL13Q8N6R0 699 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 GLIS3Q8NEA6 775 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 ASAP3Q8TDY4 903 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 SCFD1Q8WVM8 642 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 FGFBP2Q9BYJ0 223 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 TBC1D7Q9P0N9 293 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
SF3B1-204ENST00000414963 UBE4BO95155 1302 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 A0A1W2PQ45 241 aaPredicted RBP15.72■□□□□ 0.11
SF3B1-204ENST00000414963 A0A1W2PQY0 241 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 ZNF165P49910 485 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 CASP5P51878 434 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 CHMP4BP1P59074 171 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 GTF2BQ00403 316 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 ITGA7Q13683 1181 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 HAUS6Q7Z4H7 955 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 TMEM161BQ8NDZ6 487 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 FAM200AQ8TCP9 573 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 U2AF1L4Q8WU68 220 aaKnown RBP15.72■□□□□ 0.11
SF3B1-204ENST00000414963 HVCN1Q96D96 273 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 NFKBIZQ9BYH8 718 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 ARHGAP28Q9P2N2 729 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 RWDD2AQ9UIY3 292 aa15.72■□□□□ 0.11
SF3B1-204ENST00000414963 PSMA7O14818 248 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 TREHO43280 583 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 GCNT3O95395 438 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 MYCP01106 439 aaPredicted RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 RPLP2P05387 115 aaKnown RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 MYBP10242 640 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 NMT1P30419 496 aaKnown RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 HOXD13P35453 343 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 GJA8P48165 433 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 CLCN3P51790 818 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 CAPSQ13938 189 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 TFDP1Q14186 410 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 IQCB1Q15051 598 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 CDCA2Q69YH5 1023 aaPredicted RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 CENPPQ6IPU0 288 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 GDF6Q6KF10 455 aaPredicted RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 TAF2Q6P1X5 1199 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 RPAINQ86UA6 219 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
SF3B1-204ENST00000414963 NME8Q8N427 588 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 ANKLE1Q8NAG6 615 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 ZBTB10Q96DT7 871 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 MED15Q96RN5 788 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 KMT5AQ9NQR1 393 aa15.71■□□□□ 0.11
SF3B1-204ENST00000414963 FRMPD3Q5JV73 1810 aa15.71■□□□□ 0.1
SF3B1-204ENST00000414963 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
SF3B1-204ENST00000414963 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 IKBKBO14920 756 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 SLC16A4O15374 487 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
SF3B1-204ENST00000414963 CYP2C9P11712 490 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 CCNE1P24864 410 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 CDK7P50613 346 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 EFNA5P52803 228 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 ZNF200P98182 395 aaPredicted RBP15.7■□□□□ 0.1
SF3B1-204ENST00000414963 PAK1Q13153 545 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 KNOP1Q1ED39 458 aaKnown RBP15.7■□□□□ 0.1
SF3B1-204ENST00000414963 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
SF3B1-204ENST00000414963 RUFY4Q6ZNE9 571 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 SERINC5Q86VE9 423 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 ENOX1Q8TC92 643 aaKnown RBP15.7■□□□□ 0.1
SF3B1-204ENST00000414963 NELFBQ8WX92 580 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 MAP7D2Q96T17 732 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 MCOLN1Q9GZU1 580 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 KCTD10Q9H3F6 313 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 TMEM134Q9H6X4 195 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 STARD7Q9NQZ5 370 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
SF3B1-204ENST00000414963 PHLPP2Q6ZVD8 1323 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 ADGRA3Q8IWK6 1321 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 K7ENM7 598 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 ARVCFO00192 962 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
SF3B1-204ENST00000414963 PTENP60484 403 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 ZCWPW2Q504Y3 356 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 ZC2HC1CQ53FD0 456 aaPredicted RBP15.69■□□□□ 0.1
SF3B1-204ENST00000414963 KLHL10Q6JEL2 608 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 ZNF410Q86VK4 478 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 RHPN2Q8IUC4 686 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 DHX40Q8IX18 779 aaKnown RBP15.69■□□□□ 0.1
SF3B1-204ENST00000414963 DEPTORQ8TB45 409 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 PPP1R13LQ8WUF5 828 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 TMEM174Q8WUU8 243 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 P2RX5Q93086 422 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 RBSNQ9H1K0 784 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 C2orf40Q9H1Z8 148 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 ADAMTS10Q9H324 1103 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 SEMA6BQ9H3T3 888 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 TMEM206Q9H813 350 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 TBX20Q9UMR3 447 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 AKT3Q9Y243 479 aa15.69■□□□□ 0.1
SF3B1-204ENST00000414963 BICDL2A1A5D9 508 aa15.68■□□□□ 0.1
SF3B1-204ENST00000414963 FSD2A1L4K1 749 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms