RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SPATA2LQ8IUW3 424 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PASD1Q8IV76 773 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 SPACA3Q8IXA5 215 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 LINC00469Q8N7U9 141 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 C7orf31Q8N865 590 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 SPERTQ8NA61 448 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC148Q8NFR7 591 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 TNIP2Q8NFZ5 429 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 OR52K2Q8NGK3 314 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC26Q8TAB7 109 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ERMNQ8TAM6 284 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ACMSDQ8TDX5 336 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 OTUD7AQ8TE49 926 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 STON2Q8WXE9 905 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PLPPR2Q96GM1 343 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ACSBG1Q96GR2 724 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 CNDP2Q96KP4 475 aaKnown RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 TNIP3Q96KP6 325 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC114Q96M63 670 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 COG8Q96MW5 612 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NAP1L3Q99457 506 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NUDT16L1Q9BRJ7 211 aaKnown RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 HERC2P3Q9BVR0 1158 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NCOR1P1Q9H4R4 102 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NSUN3Q9H649 340 aaKnown RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 TRPV4Q9HBA0 871 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ABCF3Q9NUQ8 709 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 KLHL11Q9NVR0 708 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NFKBIL1Q9UBC1 381 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 MTRRQ9UBK8 725 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ZNF180Q9UJW8 692 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 MTUS1Q9ULD2 1270 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PHTF1Q9UMS5 762 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PCDHA4Q9UN74 947 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 COG5Q9UP83 839 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ANGPTL3Q9Y5C1 460 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ZNF804BA4D1E1 1349 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SPAG9O60271 1321 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 EVC2Q86UK5 1308 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 EIF3FO00303 357 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 AREL1O15033 823 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 NCAM2O15394 837 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ZBTB14O43829 449 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 NUAK1O60285 661 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 KDM1AO60341 852 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TIPRLO75663 272 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ABLIM3O94929 683 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SLITRK5O94991 958 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 IL33O95760 270 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CD4P01730 458 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SRFP11831 508 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 HSD3B1P14060 373 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CYP11B2P19099 503 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TRIM21P19474 475 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ITIH2P19823 946 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 RDXP35241 583 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 GDNFP39905 211 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ECE1P42892 770 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TNNT3P45378 269 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 NASPP49321 788 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ATP2B2Q01814 1243 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 RELQ04864 619 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 IKQ13123 557 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 IKZF1Q13422 519 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 BECN1Q14457 450 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SLBPQ14493 270 aaKnown RBP eCLIP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SEMA3AQ14563 771 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SAFBQ15424 915 aaKnown RBP eCLIP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 OASLQ15646 514 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 NKG7Q16617 165 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 WSCD2Q2TBF2 565 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 KBTBD12Q3ZCT8 623 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 C5orf22Q49AR2 442 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 VWA3BQ502W6 1294 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 C2orf27AQ580R0 203 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 MEI1Q5TIA1 1274 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 MEX3CQ5U5Q3 659 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC30Q5VVM6 783 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TRIM68Q6AZZ1 485 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 FCRLBQ6BAA4 426 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 RETSATQ6NUM9 610 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CNSTQ6PJW8 725 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 MTHFD1LQ6UB35 978 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 OLFML1Q6UWY5 402 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 DSTYKQ6XUX3 929 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC186Q7Z3E2 898 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ZER1Q7Z7L7 766 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 NLRP10Q86W26 655 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC13Q8IYE1 715 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TEX11Q8IYF3 940 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TBC1D21Q8IYX1 336 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SLC7A5P1Q8MH63 180 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CBARPQ8N350 705 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 NAT8LQ8N9F0 302 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ZNF540Q8NDQ6 660 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SSH3Q8TE77 659 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 HNRNPLLQ8WVV9 542 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 MFSD3Q96ES6 412 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 DIRC2Q96SL1 478 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms