RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 KCNK18Q7Z418 384 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 PLEKHH3Q7Z736 793 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 RTKN2Q8IZC4 609 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 OR14C36Q8NHC7 312 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 SSH1Q8WYL5 1049 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 LPPQ93052 612 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 MTMR8Q96EF0 704 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 WDR92Q96MX6 357 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 CCDC8Q9H0W5 538 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 OR10A2Q9H208 303 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 PARD6AQ9NPB6 346 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 USP40Q9NVE5 1235 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 ZDHHC9Q9Y397 364 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 CTDP1Q9Y5B0 961 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 FZD9O00144 591 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 H2AFYO75367 372 aaKnown RBP5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 CFBP00751 764 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 RBP3P10745 1247 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 MTNR1BP49286 362 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 MEOX1P50221 254 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 EPHB4P54760 987 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 PPARAQ07869 468 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 SPIDRQ14159 915 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 SURF1Q15526 300 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 GPR155Q7Z3F1 870 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 CLEC14AQ86T13 490 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 C1orf162Q8NEQ5 155 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 GAB3Q8WWW8 586 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 FDXACB1Q9BRP7 624 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 SLC13A1Q9BZW2 595 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 ZCCHC4Q9H5U6 513 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 MSL2Q9HCI7 577 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 ZNF277Q9NRM2 450 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 PTPN22Q9Y2R2 807 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 CDY2AQ9Y6F7 541 aa5.19□□□□□ -1.58
HMGB1P11-201ENST00000413899 NISCHQ9Y2I1 1504 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 SHTN1A0MZ66 631 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 PMS2P1A4D2B8 440 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 FSBPO95073 299 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 LPLP06858 475 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 IARSP41252 1262 aaKnown RBP5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 LGALS4P56470 323 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 HGFACQ04756 655 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 MUM1Q2TAK8 710 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 UNC5BQ8IZJ1 945 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 FEZF2Q8TBJ5 459 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 TGFBRAP1Q8WUH2 860 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 AUTS2Q8WXX7 1259 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 PAWRQ96IZ0 340 aaKnown RBP5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 PUS7Q96PZ0 661 aaKnown RBP5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 KIAA1683Q9H0B3 1180 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 SEC61A2Q9H9S3 476 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 JADE2Q9NQC1 790 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 EVLQ9UI08 416 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 DNAI1Q9UI46 699 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 MAGEL2Q9UJ55 1249 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
HMGB1P11-201ENST00000413899 A0A1W2PR48 441 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 OTOL1A6NHN0 477 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 CNOT4O95628 575 aaKnown RBP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 GAAP10253 952 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 AGXTP21549 392 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 XPAP23025 273 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 SLC5A3P53794 718 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 NRG3P56975 720 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 SRSF2Q01130 221 aaKnown RBP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 ABCB5Q2M3G0 1257 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 ANO4Q32M45 955 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 USP30Q70CQ3 517 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 GAREM2Q75VX8 874 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 GLB1L2Q8IW92 636 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 TSPEARQ8WU66 669 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 SLC7A6OSQ96CW6 309 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 FUBP3Q96I24 572 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 FAXDC2Q96IV6 333 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 TEPSINQ96N21 525 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 QRSL1Q9H0R6 528 aaKnown RBP5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 DNAJC28Q9NX36 388 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 DPP7Q9UHL4 492 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 RAPGEFL1Q9UHV5 662 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 EDARQ9UNE0 448 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 INVSQ9Y283 1065 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 DUSP10Q9Y6W6 482 aa5.17□□□□□ -1.58
HMGB1P11-201ENST00000413899 MTSS1O43312 755 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 B4GALT4O60513 344 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 LY86O95711 162 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 HNRNPLP14866 589 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 RRADP55042 308 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 PPP2CBP62714 309 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 PPP2CAP67775 309 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 MEF2AQ02078 507 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 ADAM15Q13444 863 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 FZD5Q13467 585 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 TBR1Q16650 682 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 RNF151Q2KHN1 245 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms