RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ST18O60284 1047 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 GFRA3O60609 400 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 F12P00748 615 aaPredicted RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 PDGFBP01127 241 aaPredicted RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 STAG3L1P0CL83 205 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 SP100P23497 879 aaPredicted RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 PLCB4Q15147 1175 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 DUSP6Q16828 381 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 VARS2Q5ST30 1063 aaKnown RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 IER5Q5VY09 327 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 HEATR3Q7Z4Q2 680 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 PLPP7Q8NBV4 271 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 ATP8B4Q8TF62 1192 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 APOL5Q9BWW9 433 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 CELF4Q9BZC1 486 aaKnown RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 TLE6Q9H808 572 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 UPF2Q9HAU5 1272 aaKnown RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 ERVK-5Q9HDB9 667 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 TLR9Q9NR96 1032 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 SQORQ9Y6N5 450 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 KDM3AQ9Y4C1 1321 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 RRN3P2A6NIE6 340 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 FSCN2O14926 492 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 FGF18O76093 207 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 RPLP2P05387 115 aaKnown RBP9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 JUNDP17535 347 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 ATF7P17544 494 aaPredicted RBP9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 SMARCA1P28370 1054 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 SARSP49591 514 aaKnown RBP9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 ERVFC1P60507 584 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 ACTR2P61160 394 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PKN1Q16512 942 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PTPN21Q16825 1174 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PTPRNQ16849 979 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 EML3Q32P44 896 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 SPOUT1Q5T280 376 aaKnown RBP9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PLPP4Q5VZY2 271 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 ANKMY2Q8IV38 441 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 COLGALT1Q8NBJ5 622 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 TMEM40Q8WWA1 233 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PPP1R16BQ96T49 567 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PRRX2Q99811 253 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 AZI2Q9H6S1 392 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PSTPIP2Q9H939 334 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 JADE2Q9NQC1 790 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 SLC9A2Q9UBY0 812 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 CDH22Q9UJ99 828 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 GINS2Q9Y248 185 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 PCDHA2Q9Y5H9 948 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 NID2Q14112 1375 aa9.37□□□□□ -0.91
UPF3AP1-201ENST00000413731 SMIM35A0A1B0GVV1 85 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 SPDYE3A6NKU9 549 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 CPLX1O14810 134 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 FGFR1P11362 822 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 CDC27P30260 824 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 SERPINB4P48594 390 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 NAPAP54920 295 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 CCT2P78371 535 aaKnown RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 KRT76Q01546 638 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 AKAP17AQ02040 695 aaKnown RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 UBE3AQ05086 875 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 ITGB3BPQ13352 177 aaPredicted RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 FAM102BQ5T8I3 360 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 LLGL2Q6P1M3 1020 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 SYCE2Q6PIF2 218 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 MTHFD1LQ6UB35 978 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 FBXL16Q8N461 479 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 ARMC2Q8NEN0 867 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 CYP2W1Q8TAV3 490 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 MICAL1Q8TDZ2 1067 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 PGBD1Q96JS3 809 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 AGXT2Q9BYV1 514 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 PCDHA6Q9UN73 950 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 PCDHB7Q9Y5E2 793 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 PCDHB12Q9Y5F1 795 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 PCDHA8Q9Y5H6 950 aa9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 ZFHX2Q9C0A1 2572 aaPredicted RBP9.36□□□□□ -0.91
UPF3AP1-201ENST00000413731 DENND3A2RUS2 1198 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 C9IYK1 514 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 LZTS3O60299 673 aaPredicted RBP9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 AVPR2P30518 371 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 ADD1P35611 737 aaKnown RBP9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 PBX3P40426 434 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 TECP42680 631 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 STAT5BP51692 787 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 STK3Q13188 491 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 KCNC3Q14003 757 aa9.35□□□□□ -0.91
UPF3AP1-201ENST00000413731 ANKRD1Q15327 319 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms