RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 VCAM1P19320 739 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 PTGIRP43119 386 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 FMO5P49326 533 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 PPARDQ03181 441 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 KCTD1Q719H9 257 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 CEP57Q86XR8 500 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 RHOT2Q8IXI1 618 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 POLR3CQ9BUI4 534 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-202ENST00000413219 NSRP1Q9H0G5 558 aaKnown RBP19.07■□□□□ 0.64
SDCBP-202ENST00000413219 VEZTQ9HBM0 779 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 GOPCQ9HD26 462 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 ERVK-5Q9HDB9 667 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.07■□□□□ 0.64
SDCBP-202ENST00000413219 PCYOX1Q9UHG3 505 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 TRPC6Q9Y210 931 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 PCDHA1Q9Y5I3 950 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 CFAP73A6NFT4 308 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 TULP1O00294 542 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-202ENST00000413219 MEIS1O00470 390 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 PODXLO00592 558 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 CLIC2O15247 247 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 GGPS1O95749 300 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 PLTPP55058 493 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 RIPK1Q13546 671 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 C11orf63Q6NUN7 778 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 SCLT1Q96NL6 688 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 SELENOSQ9BQE4 189 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 INTS9Q9NV88 658 aaKnown RBP19.07■□□□□ 0.64
SDCBP-202ENST00000413219 GRHL1Q9NZI5 618 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 SAMD15Q9P1V8 674 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 MTRF1LQ9UGC7 380 aaKnown RBP19.07■□□□□ 0.64
SDCBP-202ENST00000413219 RSPH10B2B2RC85 870 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 MEIS2O14770 477 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 RSPH10BP0C881 870 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 TNFAIP3P21580 790 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 RFX1P22670 979 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 SHMT1P34896 483 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 MMP14P50281 582 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 PRR16Q569H4 304 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 TNFAIP8L3Q5GJ75 292 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 CRELD2Q6UXH1 353 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-202ENST00000413219 FBXO25Q8TCJ0 367 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 GLG1Q92896 1179 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 LENG9Q96B70 501 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 ARHGEF26Q96DR7 871 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 SNX24Q9Y343 169 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 GREB1LQ9C091 1923 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-202ENST00000413219 PFASO15067 1338 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 UBE4BO95155 1302 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 RPTORQ8N122 1335 aa19.06■□□□□ 0.64
SDCBP-202ENST00000413219 ATP2C2O75185 946 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 ATP6V1G2O95670 118 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 ABCB4P21439 1286 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 PICALMQ13492 652 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 KIF22Q14807 665 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 LRRC34Q8IZ02 419 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 N4BP2L2Q92802 583 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-202ENST00000413219 RUSC1Q9BVN2 902 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 GPR88Q9GZN0 384 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 AZI2Q9H6S1 392 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 ZMYM2Q9UBW7 1377 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 FOSP01100 380 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-202ENST00000413219 SLC29A2Q14542 456 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 SLMAPQ14BN4 828 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 PPP2R5AQ15172 486 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 UBL4BQ8N7F7 174 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 CCDC63Q8NA47 563 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 DCAF4Q8WV16 495 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 ALG3Q92685 438 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 ARHGEF1Q92888 912 aaKnown RBP19.05■□□□□ 0.64
SDCBP-202ENST00000413219 RUNDC3BQ96NL0 473 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 BHMT2Q9H2M3 363 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 SUGT1Q9Y2Z0 365 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 RABGAP1Q9Y3P9 1069 aa19.05■□□□□ 0.64
SDCBP-202ENST00000413219 ALAS1P13196 640 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 CTNNA2P26232 953 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 CIITAP33076 1130 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 INTS2Q9H0H0 1204 aaKnown RBP19.04■□□□□ 0.64
SDCBP-202ENST00000413219 THAP2Q9H0W7 228 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 APEX2Q9UBZ4 518 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 CEP83Q9Y592 693 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 OPLAHO14841 1288 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 SREBF1P36956 1147 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 ZNF211Q13398 564 aaPredicted RBP19.04■□□□□ 0.64
SDCBP-202ENST00000413219 PPP1R7Q15435 360 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 MFSD5Q6N075 450 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 HIBCHQ6NVY1 386 aaPredicted RBP19.04■□□□□ 0.64
SDCBP-202ENST00000413219 TLDC1Q6P9B6 456 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 TAOK1Q7L7X3 1001 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 TRPM8Q7Z2W7 1104 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 CNBD1Q8NA66 436 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 CCHCR1Q8TD31 782 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 VTI1AQ96AJ9 217 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 CCDC17Q96LX7 622 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 NOD2Q9HC29 1040 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 VAV3Q9UKW4 847 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 COG5Q9UP83 839 aa19.04■□□□□ 0.64
SDCBP-202ENST00000413219 AFF2P51816 1311 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 TLDC2A0PJX2 215 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms