RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 IL31RAQ8NI17 732 aa12.49□□□□□ -0.41
TRAFD1-202ENST00000412615 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-202ENST00000412615 ACCSQ96QU6 501 aa12.49□□□□□ -0.41
TRAFD1-202ENST00000412615 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
TRAFD1-202ENST00000412615 RBBP6Q7Z6E9 1792 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-202ENST00000412615 CLSTN1O94985 981 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 PLS3P13797 630 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 GALCP54803 685 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 ITGB3BPQ13352 177 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 DNAAF5Q86Y56 855 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 DHX37Q8IY37 1157 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 VTI1AQ96AJ9 217 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 CCDC43Q96MW1 224 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 TIPINQ9BVW5 301 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 CWC15Q9P013 229 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 SUCLA2Q9P2R7 463 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 CEP104O60308 925 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 HSF2BPO75031 334 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 CALR3Q96L12 384 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 RUFY1Q96T51 708 aa12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 PDGFDQ9GZP0 370 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 CTDP1Q9Y5B0 961 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-202ENST00000412615 GOLGA8KD6RF30 607 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 P4HA2O15460 535 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 RPS6KA5O75582 802 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 TMEM253P0C7T8 217 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 TNFAIP3P21580 790 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 CARSP49589 748 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 SNRPFP62306 86 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 DAAM2Q86T65 1068 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 SCFD2Q8WU76 684 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 CTNNBL1Q8WYA6 563 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 STXBP5LQ9Y2K9 1186 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 LOXHD1Q8IVV2 1947 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 GOLGA6CA6NDK9 693 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 IVLP07476 585 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 GOLGA6DP0CG33 693 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 VAMP7P51809 220 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 PPFIA1Q13136 1202 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 KLHL7Q8IXQ5 586 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 METTL13Q8N6R0 699 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 RFFLQ8WZ73 363 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.415e-7■■■□□ 18.9
TRAFD1-202ENST00000412615 SYT11Q9BT88 431 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 ST6GALNAC4Q9H4F1 302 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 GOLGA6AQ9NYA3 693 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
TRAFD1-202ENST00000412615 CCDC188H7C350 402 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 ZBED4O75132 1171 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 RPS6P62753 249 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 GTF2BQ00403 316 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 PHLDB3Q6NSJ2 640 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 C4orf19Q8IY42 314 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 XXYLT1Q8NBI6 393 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 TSEN2Q8NCE0 465 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 LMO3Q8TAP4 145 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 JDP2Q8WYK2 163 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 SH3GL2Q99962 352 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 PCIF1Q9H4Z3 704 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 AMFRQ9UKV5 643 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 MAPK13O15264 365 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 RAD51CO43502 376 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 FDX1P10109 184 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 EIF2AK2P19525 551 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 KIF22Q14807 665 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 PGM5Q15124 567 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 NT5DC3Q86UY8 548 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 OLIG1Q8TAK6 271 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 TEPSINQ96N21 525 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 TCEAL9Q9UHQ7 104 aa12.46□□□□□ -0.41
TRAFD1-202ENST00000412615 NCANO14594 1321 aa12.46□□□□□ -0.42
TRAFD1-202ENST00000412615 EMSYQ7Z589 1322 aa12.46□□□□□ -0.42
TRAFD1-202ENST00000412615 ESYT3A0FGR9 886 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms