RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 MCPH1Q8NEM0 835 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ASAP3Q8TDY4 903 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 MRPL1Q9BYD6 325 aaKnown RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 GINS2Q9Y248 185 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 TSC22D4Q9Y3Q8 395 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 CFAP69A5D8W1 941 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 IMPDH2P12268 514 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ARFIP2P53365 341 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 SNF8Q96H20 258 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 SGSM3Q96HU1 749 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 RUBCNLQ9H714 662 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ARMT1Q9H993 441 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 BFARQ9NZS9 450 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 PRKAG2Q9UGJ0 569 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 KCNJ6P48051 423 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 DMC1Q14565 340 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 STILQ15468 1287 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 EAPPQ56P03 285 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 GJC2Q5T442 439 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 TRMT44Q8IYL2 757 aaKnown RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 TBC1D7Q9P0N9 293 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ADGRA3Q8IWK6 1321 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 WDR19Q8NEZ3 1342 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 CYP2C19P33261 490 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 RIPPLY1Q0D2K3 151 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 PRKG1Q13976 671 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 SARM1Q6SZW1 724 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 RNF217Q8TC41 542 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 PRPF18Q99633 342 aaKnown RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ZSWIM6Q9HCJ5 1215 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 KMT5AQ9NQR1 393 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 GCC2Q8IWJ2 1684 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 E5RI56 91 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 OSBPP22059 807 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 CYP4F22Q6NT55 531 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 LARGE2Q8N3Y3 721 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 CALML6Q8TD86 181 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 TIPINQ9BVW5 301 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 TBKBP1A7MCY6 615 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 NDUFA10O95299 355 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 KCTD16Q68DU8 428 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ARHGAP27Q6ZUM4 889 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 MICALL2Q8IY33 904 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ZBTB38Q8NAP3 1195 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF280CQ8ND82 737 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 DYDC2Q96IM9 177 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 SPTLC3Q9NUV7 552 aa7.84□□□□□ -1.15
PTPN3-203ENST00000412145 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-203ENST00000412145 ABCC10Q5T3U5 1492 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 CCNE1P24864 410 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 KIAA1841Q6NSI8 718 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 FAM45BPQ6NSW5 357 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 TBC1D1Q86TI0 1168 aaPredicted RBP7.84□□□□□ -1.16
PTPN3-203ENST00000412145 KIAA0825Q8IV33 1275 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 RTL3Q8N8U3 475 aaKnown RBP7.84□□□□□ -1.16
PTPN3-203ENST00000412145 TMEM35BQ8NCS4 154 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 IFT43Q96FT9 208 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 TESK2Q96S53 571 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 PACSIN1Q9BY11 444 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 RAD21L1Q9H4I0 556 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 PNMA3Q9UL41 463 aa7.84□□□□□ -1.16
PTPN3-203ENST00000412145 SFSWAPQ12872 951 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 C16orf62Q7Z3J2 963 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 APPL2Q8NEU8 664 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 RIN3Q8TB24 985 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 GDAP1Q8TB36 358 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 QKIQ96PU8 341 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 MRFAP1Q9Y605 127 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ZNF532Q9HCE3 1301 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FMNL1O95466 1100 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FCGR1AP12314 374 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FAM160B2Q86V87 743 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ELOA2Q8IYF1 753 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 SLC35F6Q8N357 371 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ZNF579Q8NAF0 562 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ERVV-2B6SEH9 535 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 GUCA1CO95843 209 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 TTLL1O95922 423 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 AGTP01019 485 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ICA1Q05084 483 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 TAB1Q15750 504 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 SLC44A4Q53GD3 710 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ARMCX4Q5H9R4 360 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FAF2Q96CS3 445 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 RMND5BQ96G75 393 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 IARS2Q9NSE4 1012 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 IP6K2Q9UHH9 426 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 PCDHA13Q9Y5I0 950 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 RFX7Q2KHR2 1363 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 MTSS1O43312 755 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 MOCS3O95396 460 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 PSMA2P25787 234 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 TRIP4Q15650 581 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 MB21D1Q8N884 522 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FANCLQ9NW38 375 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms