RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 R3HDMLQ9H3Y0 253 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 PCDHA9Q9Y5H5 950 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 TOX4O94842 621 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 APPP05067 770 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 JUNP05412 331 aaKnown RBP3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 VSIG10L2P0DP72 767 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 NPEPPSP55786 919 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 GNL2Q13823 731 aaKnown RBP3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 ERCC6LQ2NKX8 1250 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 NAIF1Q69YI7 327 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 SP5Q6BEB4 398 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 Q6YL49 198 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 PLA2G15Q8NCC3 412 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 ST13P5Q8NFI4 369 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 NELL1Q92832 810 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 EIF2B4Q9UI10 523 aaKnown RBP3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 INSL6Q9Y581 213 aa3.77□□□□□ -1.81
HMGB3P2-201ENST00000411913 CENPVL1A0A0U1RR11 272 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 RASSF10A6NK89 507 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 PROB1E7EW31 1015 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 TRIM24O15164 1050 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 DAPK3O43293 454 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 ZEB1P37275 1124 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 AVPR1BP47901 424 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 ANTXR2P58335 489 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 ALDH6A1Q02252 535 aaKnown RBP3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 DGKDQ16760 1214 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 TM4SF20Q53R12 229 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 DCAF17Q5H9S7 520 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 NOSTRINQ8IVI9 506 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 OR5AN1Q8NGI8 311 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 CAVIN3Q969G5 261 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 WDR11Q9BZH6 1224 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 SERHL2Q9H4I8 314 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 ANKFY1Q9P2R3 1169 aa3.76□□□□□ -1.81
HMGB3P2-201ENST00000411913 LPXNO60711 386 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 IGSF3O75054 1194 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 HIP1RO75146 1068 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 SUMO1P63165 101 aaKnown RBP3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 SPIDRQ14159 915 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 NAALADL2Q58DX5 795 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 MICALCLQ6ZW33 695 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 ANKS3Q6ZW76 656 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 APBB1IPQ7Z5R6 666 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 CLEC14AQ86T13 490 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 CXorf67Q86X51 503 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 CMTR2Q8IYT2 770 aaKnown RBP3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 CMTM4Q8IZR5 234 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 E2F7Q96AV8 911 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 MYEOVQ96EZ4 313 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 WDR92Q96MX6 357 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 SPATA5L1Q9BVQ7 753 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 EPC1Q9H2F5 836 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 ZNF768Q9H5H4 540 aaKnown RBP3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 TESQ9UGI8 421 aaKnown RBP3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 B3GALT1Q9Y5Z6 326 aa3.75□□□□□ -1.81
HMGB3P2-201ENST00000411913 TRBV23-1A0A0A0MS06 115 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 SLC12A8A0AV02 714 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 CRTAMO95727 393 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 ZFP36P26651 326 aaKnown RBP3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 SDHAP31040 664 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 ELLP55199 621 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 SLC6A3Q01959 620 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 ROM1Q03395 351 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 CATSPEREQ5SY80 951 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 FSTL4Q6MZW2 842 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 SLC7A14Q8TBB6 771 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 DLG3Q92796 817 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 NKD2Q969F2 451 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 DYDC2Q96IM9 177 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 FOXB1Q99853 325 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 CPPED1Q9BRF8 314 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 SPATA9Q9BWV2 254 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 SLC46A2Q9BY10 475 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 KCNH6Q9H252 994 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 PRDM13Q9H4Q3 707 aa3.74□□□□□ -1.81
HMGB3P2-201ENST00000411913 STC2O76061 302 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 RASGRP1O95267 797 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 C1RP00736 705 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 CTGFP29279 349 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 CXCR5P32302 372 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 PTH2RP49190 550 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 RGS3P49796 1198 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 GABREP78334 506 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 CCDC62Q6P9F0 684 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 BOLLQ8N9W6 283 aaKnown RBP3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 SLC43A3Q8NBI5 491 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 SREK1Q8WXA9 508 aaKnown RBP3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 DRC1Q96MC2 740 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 C14orf93Q9H972 538 aaKnown RBP3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 KCMF1Q9P0J7 381 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 USP35Q9P2H5 1018 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 DNAI1Q9UI46 699 aa3.73□□□□□ -1.81
HMGB3P2-201ENST00000411913 MYADML2A6NDP7 307 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 AHRRA9YTQ3 701 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 RNASET2O00584 256 aaKnown RBP3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 FGRP09769 529 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 KIR2DL3P43628 341 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 ARID5AQ03989 594 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 SF3A1Q15459 793 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms