RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 CYP26B1Q9NR63 512 aa25.01■■□□□ 1.59
MSH6-202ENST00000411819 CD207Q9UJ71 328 aa25.01■■□□□ 1.59
MSH6-202ENST00000411819 MBTPS2O43462 519 aa25■■□□□ 1.59
MSH6-202ENST00000411819 BAG4O95429 457 aaKnown RBP25■■□□□ 1.59
MSH6-202ENST00000411819 P4HBP07237 508 aaKnown RBP25■■□□□ 1.59
MSH6-202ENST00000411819 POLGP54098 1239 aaPredicted RBP25■■□□□ 1.59
MSH6-202ENST00000411819 NPEPPSP55786 919 aa25■■□□□ 1.59
MSH6-202ENST00000411819 TMEM31Q5JXX7 168 aa25■■□□□ 1.59
MSH6-202ENST00000411819 EFHBQ8N7U6 833 aa25■■□□□ 1.59
MSH6-202ENST00000411819 NSUN7Q8NE18 718 aaKnown RBP25■■□□□ 1.59
MSH6-202ENST00000411819 SLC7A3Q8WY07 619 aa25■■□□□ 1.59
MSH6-202ENST00000411819 CEP170P1Q96L14 293 aa25■■□□□ 1.59
MSH6-202ENST00000411819 LXNQ9BS40 222 aa25■■□□□ 1.59
MSH6-202ENST00000411819 INO80BQ9C086 356 aaPredicted RBP25■■□□□ 1.59
MSH6-202ENST00000411819 BMP2KQ9NSY1 1161 aaPredicted RBP25■■□□□ 1.59
MSH6-202ENST00000411819 PRKAG3Q9UGI9 489 aa25■■□□□ 1.59
MSH6-202ENST00000411819 PIN4Q9Y237 131 aaKnown RBP25■■□□□ 1.59
MSH6-202ENST00000411819 ARID2Q68CP9 1835 aa25■■□□□ 1.59
MSH6-202ENST00000411819 A0A0U1RQF3 1178 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 PBX3P40426 434 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 ZP2Q05996 745 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 SMAD4Q13485 552 aaKnown RBP24.99■■□□□ 1.59
MSH6-202ENST00000411819 CLLU1OSQ5K130 101 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 LRRC55Q6ZSA7 311 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 KSR1Q8IVT5 923 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 SLFN12Q8IYM2 578 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 HELQQ8TDG4 1101 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 ZNF558Q96NG5 402 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 TLE6Q9H808 572 aa24.99■■□□□ 1.59
MSH6-202ENST00000411819 WRAP73Q9P2S5 460 aaPredicted RBP24.99■■□□□ 1.59
MSH6-202ENST00000411819 FAM86C2PA6NEL3 165 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 JAK2O60674 1132 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 CYP4A11Q02928 519 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 TRIM29Q14134 588 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 EPHA7Q15375 998 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 SMAD2Q15796 467 aaKnown RBP24.98■■□□□ 1.59
MSH6-202ENST00000411819 PLPP4Q5VZY2 271 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 TWF2Q6IBS0 349 aaKnown RBP24.98■■□□□ 1.59
MSH6-202ENST00000411819 KCNT2Q6UVM3 1135 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 CATSPER4Q7RTX7 472 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 ADHFE1Q8IWW8 467 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 DYDC2Q96IM9 177 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 CHST12Q9NRB3 414 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 RGL1Q9NZL6 768 aa24.98■■□□□ 1.59
MSH6-202ENST00000411819 PI4K2BG5E9Z4 385 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 PER2O15055 1255 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 EOMESO95936 686 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 ATF7P17544 494 aaPredicted RBP24.97■■□□□ 1.59
MSH6-202ENST00000411819 PPM1AP35813 382 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 ERVFC1P60507 584 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 ZNF579Q8NAF0 562 aaKnown RBP24.97■■□□□ 1.59
MSH6-202ENST00000411819 MRPS27Q92552 414 aaKnown RBP24.97■■□□□ 1.59
MSH6-202ENST00000411819 TNFRSF25Q93038 417 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 LRFN3Q9BTN0 628 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 ENTPD7Q9NQZ7 604 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 PUF60Q9UHX1 559 aaKnown RBP24.97■■□□□ 1.59
MSH6-202ENST00000411819 BARX2Q9UMQ3 279 aaPredicted RBP24.97■■□□□ 1.59
MSH6-202ENST00000411819 COL4A3BPQ9Y5P4 624 aa24.97■■□□□ 1.59
MSH6-202ENST00000411819 YWHABP31946 246 aaKnown RBP24.96■■□□□ 1.59
MSH6-202ENST00000411819 RFC5P40937 340 aa24.96■■□□□ 1.59
MSH6-202ENST00000411819 CTTNQ14247 550 aaKnown RBP24.96■■□□□ 1.59
MSH6-202ENST00000411819 ZNF598Q86UK7 904 aaKnown RBP24.96■■□□□ 1.59
MSH6-202ENST00000411819 C4orf19Q8IY42 314 aa24.96■■□□□ 1.59
MSH6-202ENST00000411819 DIS3L2Q8IYB7 885 aaKnown RBP24.96■■□□□ 1.59
MSH6-202ENST00000411819 EXOC8Q8IYI6 725 aa24.96■■□□□ 1.59
MSH6-202ENST00000411819 MRPL9Q9BYD2 267 aaKnown RBP24.96■■□□□ 1.59
MSH6-202ENST00000411819 PPME1Q9Y570 386 aa24.96■■□□□ 1.59
MSH6-202ENST00000411819 BTBD18B2RXH4 712 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 SEC24BO95487 1268 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 GLP2RO95838 553 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 PHKA2P46019 1235 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 PLCB3Q01970 1234 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 SPIRE1Q08AE8 756 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 CALCRLQ16602 461 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 LONRF3Q496Y0 759 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 XKR9Q5GH70 373 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 PDE12Q6L8Q7 609 aaKnown RBP24.95■■□□□ 1.58
MSH6-202ENST00000411819 OTUD6AQ7L8S5 288 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 PSPC1Q8WXF1 523 aaKnown RBP24.95■■□□□ 1.58
MSH6-202ENST00000411819 TMEM143Q96AN5 459 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 MSLNLQ96KJ4 702 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 POP1Q99575 1024 aaKnown RBP24.95■■□□□ 1.58
MSH6-202ENST00000411819 TCF25Q9BQ70 676 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 DHX33Q9H6R0 707 aaKnown RBP24.95■■□□□ 1.58
MSH6-202ENST00000411819 ZSWIM4Q9H7M6 989 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 CLEC1BQ9P126 229 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 LZTS1Q9Y250 596 aa24.95■■□□□ 1.58
MSH6-202ENST00000411819 FSCN2O14926 492 aa24.94■■□□□ 1.58
MSH6-202ENST00000411819 KRT17Q04695 432 aa24.94■■□□□ 1.58
MSH6-202ENST00000411819 EMC2Q15006 297 aa24.94■■□□□ 1.58
MSH6-202ENST00000411819 TPH2Q8IWU9 490 aa24.94■■□□□ 1.58
MSH6-202ENST00000411819 LPPQ93052 612 aa24.94■■□□□ 1.58
MSH6-202ENST00000411819 SPG21Q9NZD8 308 aa24.94■■□□□ 1.58
MSH6-202ENST00000411819 FSD2A1L4K1 749 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 NEMFO60524 1076 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 SKIP12755 728 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 ALADP13716 330 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 DUSP6Q16828 381 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 SMRP1Q8NCR6 262 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 PRPF31Q8WWY3 499 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms