RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ARMT1Q9H993 441 aa8.22□□□□□ -1.09
UBE2F-204ENST00000409953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBE2F-204ENST00000409953 PADI3Q9ULW8 664 aa8.22□□□□□ -1.09
UBE2F-204ENST00000409953 NDRG2Q9UN36 371 aaKnown RBP8.22□□□□□ -1.09
UBE2F-204ENST00000409953 PCDHGA5Q9Y5G8 931 aa8.22□□□□□ -1.09
UBE2F-204ENST00000409953 DOPEY2Q9Y3R5 2298 aa8.22□□□□□ -1.09
UBE2F-204ENST00000409953 KIAA1217Q5T5P2 1943 aa8.21□□□□□ -1.09
UBE2F-204ENST00000409953 SPAARA0A1B0GVQ0 90 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 CAPN8A6NHC0 703 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 C3orf80F5H4A9 247 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 H0Y626 953 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 PLA2G6O60733 806 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 TRIM16O95361 564 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 TTLL1O95922 423 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 MCCP23508 829 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 RAP1GAPP47736 663 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 CLCN4P51793 760 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 STXBP2Q15833 593 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 COLEC12Q5KU26 742 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 MYSM1Q5VVJ2 828 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 PARM1Q6UWI2 310 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 LRRC55Q6ZSA7 311 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 LAPTM4BQ86VI4 370 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 VPS52Q8N1B4 723 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 STK11IPQ8N1F8 1099 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 SLC39A11Q8N1S5 342 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 FAM181AQ8N9Y4 354 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 GMCL1Q96IK5 515 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 RANBP17Q9H2T7 1088 aaKnown RBP8.21□□□□□ -1.1
UBE2F-204ENST00000409953 ATP8A2Q9NTI2 1148 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 IRAK3Q9Y616 596 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 SPAG17Q6Q759 2223 aa8.21□□□□□ -1.1
UBE2F-204ENST00000409953 RELNP78509 3460 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 CCDC195A0A1B0GUA6 201 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 LNP1A1A4G5 178 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 GGPS1O95749 300 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 PDE6AP16499 860 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 RDXP35241 583 aaKnown RBP8.2□□□□□ -1.1
UBE2F-204ENST00000409953 ABCG1P45844 678 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
UBE2F-204ENST00000409953 MRPS6P82932 125 aaKnown RBP8.2□□□□□ -1.1
UBE2F-204ENST00000409953 GIT2Q14161 759 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 UAP1L1Q3KQV9 507 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 CELF3Q5SZQ8 465 aaKnown RBP8.2□□□□□ -1.1
UBE2F-204ENST00000409953 ADGRD1Q6QNK2 874 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 CACNA2D4Q7Z3S7 1137 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 KBTBD6Q86V97 674 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 LRRC43Q8N309 656 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 DNAJB3Q8WWF6 145 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 SMG7Q92540 1137 aaKnown RBP8.2□□□□□ -1.1
UBE2F-204ENST00000409953 TMX1Q9H3N1 280 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 SLC32A1Q9H598 525 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 MKNK2Q9HBH9 465 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 TMEM9BQ9NQ34 198 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 MAN1C1Q9NR34 630 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 MTMR4Q9NYA4 1195 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 COL6A6A6NMZ7 2263 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 PTPRCP08575 1304 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 CCDC171Q6TFL3 1326 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 ZNF532Q9HCE3 1301 aa8.2□□□□□ -1.1
UBE2F-204ENST00000409953 FBN2P35556 2912 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 A0A087WV48 116 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 K7ESF4 209 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 INPPL1O15357 1258 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 MGEA5O60502 916 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 CTSAP10619 480 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 KLRC2P26717 231 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 CLCN1P35523 988 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBE2F-204ENST00000409953 G3BP1Q13283 466 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBE2F-204ENST00000409953 AAMPQ13685 434 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 SLC9C2Q5TAH2 1124 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 CYP26C1Q6V0L0 522 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 PARP9Q8IXQ6 854 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 PIP4K2CQ8TBX8 421 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 TMEM169Q96HH4 297 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 DDRGK1Q96HY6 314 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 TMEM117Q9H0C3 514 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 ATP6V0A4Q9HBG4 840 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 HEBP1Q9NRV9 189 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 SQORQ9Y6N5 450 aa8.19□□□□□ -1.1
UBE2F-204ENST00000409953 F5P12259 2224 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 DENND3A2RUS2 1198 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 RCCD1A6NED2 376 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 NT5C1B-RDH14C9J2C7 533 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 IRX6P78412 446 aaPredicted RBP8.18□□□□□ -1.1
UBE2F-204ENST00000409953 TMEM266Q2M3C6 531 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 RCSD1Q6JBY9 416 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 CTR9Q6PD62 1173 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 SLC24A5Q71RS6 500 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 MTSS1LQ765P7 747 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 RAB44Q7Z6P3 723 aaPredicted RBP8.18□□□□□ -1.1
UBE2F-204ENST00000409953 WDR5BQ86VZ2 330 aa8.18□□□□□ -1.1
UBE2F-204ENST00000409953 NSUN6Q8TEA1 469 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms