RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OSMP13725 252 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 PAMP19021 973 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 RPL10P27635 214 aaKnown RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 KIF11P52732 1056 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 EIF5P55010 431 aaKnown RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 JAM2P57087 298 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 GPSM2P81274 684 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 PPFIA1Q13136 1202 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 CNGB1Q14028 1251 aaPredicted RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 GPR19Q15760 415 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 PGS1Q32NB8 556 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 ICE2Q659A1 982 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 PRR23BQ6ZRT6 265 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 RSRC2Q7L4I2 434 aaKnown RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 OTOP3Q7RTS5 596 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 WAPLQ7Z5K2 1190 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 OSTM1Q86WC4 334 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 THEMISQ8N1K5 641 aaPredicted RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 LRTOMTQ8WZ04 291 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 SYTL4Q96C24 671 aaPredicted RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 ACSS2Q9NR19 701 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 ERVK13-1Q9NX77 482 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 POLG2Q9UHN1 485 aa5.89□□□□□ -1.47
LSM5-205ENST00000409952 EVLQ9UI08 416 aaPredicted RBP5.89□□□□□ -1.47
LSM5-205ENST00000409952 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 A0A1B0GVC2 190 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 M0R3H8 397 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 PSPNO60542 156 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 TBC1D8O95759 1140 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CYP17A1P05093 508 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 MTHFD2P13995 350 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 KRT15P19012 456 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 TNFSF4P23510 183 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 HTR1BP28222 390 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 COPB2P35606 906 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 PIK3CBP42338 1070 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 AGFG1P52594 562 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 SLC5A3P53794 718 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ALDH6A1Q02252 535 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 LSAMPQ13449 338 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CNN3Q15417 329 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 MLANAQ16655 118 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 INF2Q27J81 1249 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ANO6Q4KMQ2 910 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ZNF648Q5T619 568 aaPredicted RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 IZUMO3Q5VZ72 239 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ESRP1Q6NXG1 681 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 SLCO6A1Q86UG4 719 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 IRF2BP1Q8IU81 584 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CILP2Q8IUL8 1156 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ANKRD18AQ8IVF6 992 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 SUGP1Q8IWZ8 645 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 COA7Q96BR5 231 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ERP27Q96DN0 273 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 FAM84AQ96KN4 292 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 KCNJ15Q99712 375 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 QRSL1Q9H0R6 528 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 CDIP1Q9H305 208 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CERS4Q9HA82 394 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 RRN3Q9NYV6 651 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CLIC5Q9NZA1 410 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 USP36Q9P275 1121 aaKnown RBP5.88□□□□□ -1.47
LSM5-205ENST00000409952 KCNG1Q9UIX4 513 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 CDC23Q9UJX2 597 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 ASAP1Q9ULH1 1129 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 SLC4A7Q9Y6M7 1214 aa5.88□□□□□ -1.47
LSM5-205ENST00000409952 A0A087WV62 115 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 RHPN2P1A8MT19 583 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 SNX2O60749 519 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 USP2O75604 605 aaPredicted RBP5.87□□□□□ -1.47
LSM5-205ENST00000409952 KRT1P04264 644 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 AMY2AP04746 511 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 AMY2BP19961 511 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 ABCB4P21439 1286 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 PTX3P26022 381 aaPredicted RBP5.87□□□□□ -1.47
LSM5-205ENST00000409952 CASP5P51878 434 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 SLC16A1P53985 500 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 BLMHQ13867 455 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 PDE1CQ14123 709 aaPredicted RBP5.87□□□□□ -1.47
LSM5-205ENST00000409952 POLD3Q15054 466 aaPredicted RBP5.87□□□□□ -1.47
LSM5-205ENST00000409952 FSTL4Q6MZW2 842 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 KCNK18Q7Z418 384 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 CXorf67Q86X51 503 aaPredicted RBP5.87□□□□□ -1.47
LSM5-205ENST00000409952 NOSTRINQ8IVI9 506 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 NGDNQ8NEJ9 315 aaKnown RBP5.87□□□□□ -1.47
LSM5-205ENST00000409952 KIAA1191Q96A73 305 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 SLC2A13Q96QE2 648 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 LRFN3Q9BTN0 628 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 BTBD1Q9H0C5 482 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 RASSF1Q9NS23 344 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 PDP2Q9P2J9 529 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 MSRAQ9UJ68 235 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 GJD2Q9UKL4 321 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 PADI4Q9UM07 663 aa5.87□□□□□ -1.47
LSM5-205ENST00000409952 A0A1W2PQ45 241 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms