RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 C12orf56Q8IXR9 622 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 CBWD1Q9BRT8 395 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 LUC7LQ9NQ29 371 aaKnown RBP22.6■■□□□ 1.21
USP39-203ENST00000409470 KMT5AQ9NQR1 393 aa22.6■■□□□ 1.21
USP39-203ENST00000409470 RBAK-RBAKDNI3L0D1 243 aa22.59■■□□□ 1.21
USP39-203ENST00000409470 DGAT1O75907 488 aa22.59■■□□□ 1.21
USP39-203ENST00000409470 CHMP4BP1P59074 171 aa22.59■■□□□ 1.21
USP39-203ENST00000409470 SNRPFP62306 86 aaKnown RBP22.59■■□□□ 1.21
USP39-203ENST00000409470 WHAMMP3Q1A5X7 153 aa22.59■■□□□ 1.21
USP39-203ENST00000409470 CYP26B1Q9NR63 512 aa22.59■■□□□ 1.21
USP39-203ENST00000409470 HSPBP1Q9NZL4 362 aa22.59■■□□□ 1.21
USP39-203ENST00000409470 SOWAHBA6NEL2 793 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 ATP1A1P05023 1023 aaKnown RBP22.58■■□□□ 1.21
USP39-203ENST00000409470 SOX10P56693 466 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 AMPD2Q01433 879 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 CBWD6Q4V339 395 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 CBWD3Q5JTY5 395 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 CBWD5Q5RIA9 395 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 FBXO38Q6PIJ6 1188 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 INTS8Q75QN2 995 aaKnown RBP22.58■■□□□ 1.21
USP39-203ENST00000409470 XXYLT1Q8NBI6 393 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 TMEM161BQ8NDZ6 487 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 MCPH1Q8NEM0 835 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 ARID3AQ99856 593 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 KIFC3Q9BVG8 833 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 C17orf75Q9HAS0 396 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 TBX20Q9UMR3 447 aa22.58■■□□□ 1.21
USP39-203ENST00000409470 TACC1O75410 805 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 CNMDO75829 334 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 MYL7Q01449 175 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 SLC18A3Q16572 532 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 XKR3Q5GH77 459 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 GJB7Q6PEY0 223 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 RSRC2Q7L4I2 434 aaKnown RBP22.58■■□□□ 1.2
USP39-203ENST00000409470 TRIM58Q8NG06 486 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 TMEM174Q8WUU8 243 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 MLXIPQ9HAP2 919 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 ZNF302Q9NR11 478 aa22.58■■□□□ 1.2
USP39-203ENST00000409470 BZW2Q9Y6E2 419 aaKnown RBP22.58■■□□□ 1.2
USP39-203ENST00000409470 IGSF9BQ9UPX0 1349 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 DENND3A2RUS2 1198 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 PJA2O43164 708 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 SLC25A27O95847 323 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 OSBPP22059 807 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 MTERF2Q49AM1 385 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 IQCEQ6IPM2 695 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 FASTKD5Q7L8L6 764 aaKnown RBP22.57■■□□□ 1.2
USP39-203ENST00000409470 IRF2BP2Q7Z5L9 587 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 SPIRE2Q8WWL2 714 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 HVCN1Q96D96 273 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 ATP6V0A4Q9HBG4 840 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 HDAC6Q9UBN7 1215 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 VAMP7P51809 220 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 TRAPPC11Q7Z392 1133 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 BSNDQ8WZ55 320 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 ADAMTS1Q9UHI8 967 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 AJAP1Q9UKB5 411 aaPredicted RBP22.57■■□□□ 1.2
USP39-203ENST00000409470 SAR1BQ9Y6B6 198 aa22.57■■□□□ 1.2
USP39-203ENST00000409470 MOCS3O95396 460 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 UBA1P22314 1058 aaKnown RBP22.56■■□□□ 1.2
USP39-203ENST00000409470 EDNRBP24530 442 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 JAM2P57087 298 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 MAP4K3Q8IVH8 894 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 ANKRD13CQ8N6S4 541 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 ALS2CR12Q96Q35 445 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 INTS2Q9H0H0 1204 aaKnown RBP22.56■■□□□ 1.2
USP39-203ENST00000409470 ARID2Q68CP9 1835 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 SYNGAP1Q96PV0 1343 aa22.56■■□□□ 1.2
USP39-203ENST00000409470 A0A087X0T9 212 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 ANO9A1A5B4 782 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 ATG7O95352 703 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 TFRCP02786 760 aaKnown RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 FAM228BP0C875 321 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 PTK2Q05397 1052 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 PAPD7Q5XG87 772 aaKnown RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 GPR161Q8N6U8 529 aaKnown RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 RABGGTAQ92696 567 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 IFT74Q96LB3 600 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 NTPCRQ9BSD7 190 aaKnown RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 TAF1DQ9H5J8 278 aaPredicted RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 TXNRD2Q9NNW7 524 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 PDLIM7Q9NR12 457 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 CAPN6Q9Y6Q1 641 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 MYH9P35579 1960 aaKnown RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 DLG4P78352 724 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 ZNF526Q8TF50 670 aaPredicted RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 MPHOSPH6Q99547 160 aaKnown RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 XPNPEP1Q9NQW7 623 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 RBPJLQ9UBG7 517 aa22.55■■□□□ 1.2
USP39-203ENST00000409470 MAFBQ9Y5Q3 323 aaPredicted RBP22.55■■□□□ 1.2
USP39-203ENST00000409470 EMSYQ7Z589 1322 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 CTAGE15A4D2H0 777 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 OATP04181 439 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 CTAGE8P0CG41 777 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 H2AFXP16104 143 aaPredicted RBP22.54■■□□□ 1.2
USP39-203ENST00000409470 COPB2P35606 906 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 STAT1P42224 750 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 POLGP54098 1239 aaPredicted RBP22.54■■□□□ 1.2
USP39-203ENST00000409470 NAP1L1P55209 391 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms