RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SKILP12757 684 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 GLRA2P23416 452 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 CYP2C19P33261 490 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ARL2P36404 184 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 SYCP1Q15431 976 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 IQSEC1Q6DN90 963 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 PPFIBP1Q86W92 1011 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 MAP4K3Q8IVH8 894 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 GOLGA5Q8TBA6 731 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 KIAA1524Q8TCG1 905 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 HVCN1Q96D96 273 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 IFT74Q96LB3 600 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ERGIC2Q96RQ1 377 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 NTPCRQ9BSD7 190 aaKnown RBP15.43■□□□□ 0.06
GPNMB-203ENST00000409458 DMAC2Q9NW81 257 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ERAP1Q9NZ08 941 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 TBX20Q9UMR3 447 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 TRPC6Q9Y210 931 aa15.43■□□□□ 0.06
GPNMB-203ENST00000409458 MFAP3LO75121 409 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 IGHA2P01877 340 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 MMP3P08254 477 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 CASP14P31944 242 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 FXR1P51114 621 aaKnown RBP eCLIP15.42■□□□□ 0.06
GPNMB-203ENST00000409458 CYP2J2P51589 502 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 FCGRTP55899 365 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 DRP2Q13474 957 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 IRF5Q13568 498 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 TRIM14Q14142 442 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 CPLX3Q8WVH0 158 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 TRAPPC12Q8WVT3 735 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 LENG1Q96BZ8 264 aaPredicted RBP15.42■□□□□ 0.06
GPNMB-203ENST00000409458 TMX1Q9H3N1 280 aa15.42■□□□□ 0.06
GPNMB-203ENST00000409458 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.42■□□□□ 0.06
GPNMB-203ENST00000409458 ZNF500O60304 480 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 HBP1O60381 514 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 HOXD8P13378 290 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 APLP1P51693 650 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 TAS1R3Q7RTX0 852 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 TMEM139Q8IV31 216 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 SLC9A9Q8IVB4 645 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 CBWD1Q9BRT8 395 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 C16orf70Q9BSU1 422 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 RNPEPQ9H4A4 650 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 ARMCX3Q9UH62 379 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 GNEQ9Y223 722 aaKnown RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 IGKV6-21A0A0C4DH24 114 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 NAMPTP43490 491 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 PSMC4P43686 418 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 LACTBP83111 547 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 FAM186BQ8IYM0 893 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 ZNF784Q8NCA9 323 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-203ENST00000409458 BORCS6Q96GS4 357 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 MKNK1Q9BUB5 465 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 TTYH3Q9C0H2 523 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 EXOC7Q9UPT5 735 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 SIK3Q9Y2K2 1263 aa15.41■□□□□ 0.06
GPNMB-203ENST00000409458 LRRIQ4A6NIV6 560 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 TPM1P09493 284 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 CAPSQ13938 189 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 MYBPC2Q14324 1141 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 PPP2R5AQ15172 486 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 DCAF17Q5H9S7 520 aaPredicted RBP15.4■□□□□ 0.06
GPNMB-203ENST00000409458 LRRC71Q8N4P6 559 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 DEPTORQ8TB45 409 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 TMEM174Q8WUU8 243 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 ZBTB10Q96DT7 871 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 PANX2Q96RD6 677 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 PCIF1Q9H4Z3 704 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 METTL14Q9HCE5 456 aaKnown RBP15.4■□□□□ 0.06
GPNMB-203ENST00000409458 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
GPNMB-203ENST00000409458 GABRQQ9UN88 632 aa15.4■□□□□ 0.06
GPNMB-203ENST00000409458 TTC26A0AVF1 554 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 ANKRD63C9JTQ0 380 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 H0YCG3 227 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 GAS2O43903 313 aaKnown RBP15.39■□□□□ 0.05
GPNMB-203ENST00000409458 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 TBC1D8O95759 1140 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
GPNMB-203ENST00000409458 SNRPFP62306 86 aaKnown RBP15.39■□□□□ 0.05
GPNMB-203ENST00000409458 CAP1Q01518 475 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 KCNH2Q12809 1159 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 SLC39A4Q6P5W5 647 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 TLK2Q86UE8 772 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 CNGA4Q8IV77 575 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 ZSWIM2Q8NEG5 633 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 KCNN1Q92952 543 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
GPNMB-203ENST00000409458 SUGCTQ9HAC7 445 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 HSPBP1Q9NZL4 362 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms