RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TPH2Q8IWU9 490 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 KLHL23Q8NBE8 558 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 HAS1Q92839 578 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 NLRP4Q96MN2 994 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 ZNF558Q96NG5 402 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 CEP89Q96ST8 783 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 MTRQ99707 1265 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 RAB34Q9BZG1 259 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 DHX33Q9H6R0 707 aaKnown RBP10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 TTC12Q9H892 705 aaPredicted RBP10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 ANKEF1Q9NU02 776 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 CLDND1Q9NY35 253 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 STK39Q9UEW8 545 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 LZTS1Q9Y250 596 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 BRWD1Q9NSI6 2320 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 CNTNAP2Q9UHC6 1331 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 A0A087WZ62 844 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 ERLIN2O94905 339 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 SEC24BO95487 1268 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 ITGB1P05556 798 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 TXKP42681 527 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 CYP4A11Q02928 519 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 SPIRE1Q08AE8 756 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 C8orf34Q49A92 452 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 HAUS3Q68CZ6 603 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 PTCRAQ6ISU1 281 aaPredicted RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 GLB1LQ6UWU2 654 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 COLGALT1Q8NBJ5 622 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 RNF169Q8NCN4 708 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 CNNM3Q8NE01 707 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 SPPL3Q8TCT6 385 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 POF1BQ8WVV4 589 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 CCDC51Q96ER9 411 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 DYDC2Q96IM9 177 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 POP1Q99575 1024 aaKnown RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 CDCA3Q99618 268 aaPredicted RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 EIF2AK1Q9BQI3 630 aaKnown RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 FDXACB1Q9BRP7 624 aaPredicted RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 C1QTNF1Q9BXJ1 281 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 ALG13Q9NP73 1137 aaKnown RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 TLR9Q9NR96 1032 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 PRKAG3Q9UGI9 489 aa10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 FNDC1Q4ZHG4 1894 aaPredicted RBP10.13□□□□□ -0.79
SNORD88A-201ENST00000408314 KIAA1671Q9BY89 1806 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 TMEM150BA6NC51 233 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FGF18O76093 207 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 OR52Z1P0C646 297 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FGFR1P11362 822 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 MUTP22033 750 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 AXLP30530 894 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 MCM2P49736 904 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 NDUFV1P49821 464 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 GATMP50440 423 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FOSBP53539 338 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 NPEPPSP55786 919 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 PLCB3Q01970 1234 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 DRP2Q13474 957 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 CTTNQ14247 550 aaKnown RBP10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 EARS2Q5JPH6 523 aaKnown RBP10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FAM102BQ5T8I3 360 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FERMT3Q86UX7 667 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 NOSTRINQ8IVI9 506 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 MCPH1Q8NEM0 835 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FBXO18Q8NFZ0 1043 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 URGCPQ8TCY9 931 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 MICAL1Q8TDZ2 1067 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 MRPS27Q92552 414 aaKnown RBP10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 ZNF668Q96K58 619 aaPredicted RBP10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 MTMR9Q96QG7 549 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 HSD17B14Q9BPX1 270 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 TUFT1Q9NNX1 390 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 NGRNQ9NPE2 291 aaKnown RBP10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 UBN1Q9NPG3 1134 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 TYW1Q9NV66 732 aaKnown RBP10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 RGL1Q9NZL6 768 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 BDP1A6H8Y1 2624 aa10.12□□□□□ -0.79
SNORD88A-201ENST00000408314 FAM205CA6NFA0 338 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 LAD1O00515 517 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 ZNF623O75123 536 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 SLITRK3O94933 977 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 MCM7P33993 719 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 GUCY1B3Q02153 619 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 POU5F1BQ06416 359 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 LAMTOR4Q0VGL1 99 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 HYAL1Q12794 435 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 CTC1Q2NKJ3 1217 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 KCNT2Q6UVM3 1135 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 EFHBQ8N7U6 833 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms