RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 VPS39Q96JC1 886 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 SLC38A7Q9NVC3 462 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 BARHL2Q9NY43 387 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 KLHL8Q9P2G9 620 aaPredicted RBP17.65■□□□□ 0.42
CBX6-202ENST00000407418 STK38LQ9Y2H1 464 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 ARHGAP42A6NI28 874 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 CASP14P31944 242 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 SPOPLQ6IQ16 392 aa17.65■□□□□ 0.42
CBX6-202ENST00000407418 NMT2O60551 498 aa17.64■□□□□ 0.42
CBX6-202ENST00000407418 ZNF189O75820 626 aaPredicted RBP17.64■□□□□ 0.42
CBX6-202ENST00000407418 ESRRBO95718 433 aa17.64■□□□□ 0.42
CBX6-202ENST00000407418 FBXW4P57775 412 aa17.64■□□□□ 0.42
CBX6-202ENST00000407418 LRRC8CQ8TDW0 803 aa17.64■□□□□ 0.42
CBX6-202ENST00000407418 ITGA4P13612 1032 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 EPHA7Q15375 998 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 EFHC2Q5JST6 749 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 ENAHQ8N8S7 591 aaPredicted RBP17.64■□□□□ 0.41
CBX6-202ENST00000407418 VCX3AQ9NNX9 186 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 CEP152O94986 1710 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 GSTA4O15217 222 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 TAC1P20366 129 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 ZNF394Q53GI3 561 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 GBP5Q96PP8 586 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 KLC2Q9H0B6 622 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 POTEB3A0JP26 581 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 CDC25AP30304 524 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 SF3A3Q12874 501 aaKnown RBP eCLIP17.64■□□□□ 0.41
CBX6-202ENST00000407418 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 POTEBQ6S5H4 581 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 CYFIP1Q7L576 1253 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 STKLD1Q8NE28 680 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 PBKQ96KB5 322 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 DOLKQ9UPQ8 538 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 EVI5O60447 810 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 DCAF4L1Q3SXM0 396 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 FAM117BQ6P1L5 589 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 ARRDC4Q8NCT1 418 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 CDC26Q8NHZ8 85 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 EEF2KMTQ96G04 330 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 DEFB129Q9H1M3 183 aa17.64■□□□□ 0.41
CBX6-202ENST00000407418 GOLGA8KD6RF30 607 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 KIAA0391O15091 583 aaKnown RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 TJP3O95049 919 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 PPP6R3Q5H9R7 873 aaPredicted RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 GLB1LQ6UWU2 654 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 HAUS6Q7Z4H7 955 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 ZNF668Q96K58 619 aaPredicted RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 ABCA9Q8IUA7 1624 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 POTEMA6NI47 508 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 EFCAB8A8MWE9 144 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 NR3C1P04150 777 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 RNF149Q8NC42 400 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 LINC00301Q8NCQ3 95 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 RNF217Q8TC41 542 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 QRICH2Q9H0J4 1663 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 SART1O43290 800 aaKnown RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 SDC4P31431 198 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 TUFT1Q9NNX1 390 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 ADAM22Q9P0K1 906 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 FLT1P17948 1338 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 PNPLA7Q6ZV29 1317 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 RIMS1Q86UR5 1692 aaKnown RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 RRN3P2A6NIE6 340 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 TMCC1O94876 653 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 MUM1Q2TAK8 710 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 TMEM270Q6UE05 265 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 CREB3O43889 395 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 SNX2O60749 519 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 FOXO4P98177 505 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 GTF2H3Q13889 308 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 SEPT1Q8WYJ6 367 aa17.63■□□□□ 0.41
CBX6-202ENST00000407418 EIF2AK1Q9BQI3 630 aaKnown RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
CBX6-202ENST00000407418 SKIP12755 728 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 RHOT2Q8IXI1 618 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 GRAMD1CQ8IYS0 662 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 CAPN7Q9Y6W3 813 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 SNAP23O00161 211 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 YWHABP31946 246 aaKnown RBP17.62■□□□□ 0.41
CBX6-202ENST00000407418 ARL4DP49703 201 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 TFDP2Q14188 446 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 PBXIP1Q96AQ6 731 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 C17orf102A2RUQ5 167 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 BAATQ14032 418 aaPredicted RBP17.62■□□□□ 0.41
CBX6-202ENST00000407418 SCYL3Q8IZE3 742 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 SH3KBP1Q96B97 665 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 RBM41Q96IZ5 413 aaKnown RBP17.62■□□□□ 0.41
CBX6-202ENST00000407418 RBAKQ9NYW8 714 aaPredicted RBP17.62■□□□□ 0.41
CBX6-202ENST00000407418 NYAP2Q9P242 653 aa17.62■□□□□ 0.41
CBX6-202ENST00000407418 MOCS2O96007 188 aaPredicted RBP17.62■□□□□ 0.41
CBX6-202ENST00000407418 PROM2Q8N271 834 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms