RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 SLC26A4O43511 780 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 DKC1O60832 514 aaKnown RBP eCLIP9.27□□□□□ -0.938e-13■■■■□ 25.2
GPC3-203ENST00000406757 FGBP02675 491 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 KRT18P05783 430 aaKnown RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 RSPH10BP0C881 870 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 HOXD8P13378 290 aaPredicted RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 INSRRP14616 1297 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 IDEP14735 1019 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 IGFBP4P22692 258 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 ASIC1P78348 528 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 ZNF200P98182 395 aaPredicted RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 PURAQ00577 322 aaKnown RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 DPYDQ12882 1025 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 ADGRE1Q14246 886 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 HIC1Q14526 733 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 MFSD10Q14728 455 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 POSTNQ15063 836 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 KIAA0753Q2KHM9 967 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 C1orf186Q6ZWK4 172 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 OTUD6AQ7L8S5 288 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 SLC43A3Q8NBI5 491 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 ATP8B4Q8TF62 1192 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 HERVK_113Q902F9 699 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 DDX12PQ92771 950 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 CCDC43Q96MW1 224 aaKnown RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 WNT8AQ9H1J5 351 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 GPRC5CQ9NQ84 441 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 CYP26B1Q9NR63 512 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 ANKEF1Q9NU02 776 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 SETD4Q9NVD3 440 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 ERAP1Q9NZ08 941 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 TBC1D7Q9P0N9 293 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 USP25Q9UHP3 1055 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 DBR1Q9UK59 544 aaKnown RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 YBX2Q9Y2T7 364 aaKnown RBP9.27□□□□□ -0.93
GPC3-203ENST00000406757 PCDHA5Q9Y5H7 936 aa9.27□□□□□ -0.93
GPC3-203ENST00000406757 MYH9P35579 1960 aaKnown RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 ZBTB42B2RXF5 422 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 TNFRSF10AO00220 468 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 KLRC4O43908 158 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 ZEB2O60315 1214 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 HIP1RO75146 1068 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 CABYRO75952 493 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 RPN1P04843 607 aaKnown RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 SMIM10L2AP0DMW4 78 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 SMIM10L2BP0DMW5 78 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 XRCC6P12956 609 aaKnown RBP eCLIP9.26□□□□□ -0.936e-6■□□□□ 11.2
GPC3-203ENST00000406757 MUTP22033 750 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 RABGGTBP53611 331 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 DRP2Q13474 957 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 GIT2Q14161 759 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 RAB30Q15771 203 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 NBPF20Q3BBV1 942 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 ZSCAN23Q3MJ62 389 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 KMT5BQ4FZB7 885 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 FAM102BQ5T8I3 360 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 KANK3Q6NY19 840 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 LRRC71Q8N4P6 559 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 ATXN2LQ8WWM7 1075 aaKnown RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 TMEM143Q96AN5 459 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 DNAJC19Q96DA6 116 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 SCLYQ96I15 445 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 ZNF668Q96K58 619 aaPredicted RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 CEP89Q96ST8 783 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 REEP2Q9BRK0 252 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 MTG1Q9BT17 334 aaPredicted RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 NOC4LQ9BVI4 516 aaKnown RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 NIFKQ9BYG3 293 aaKnown RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 TRIM9Q9C026 710 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 MTIF3Q9H2K0 278 aaKnown RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 CUEDC2Q9H467 287 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 SUGCTQ9HAC7 445 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 SLC28A3Q9HAS3 691 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 THEGQ9P2T0 379 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 HDAC6Q9UBN7 1215 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 MAN1B1Q9UKM7 699 aa9.26□□□□□ -0.93
GPC3-203ENST00000406757 ZNF215Q9UL58 517 aaPredicted RBP9.26□□□□□ -0.93
GPC3-203ENST00000406757 ZBBXA8MT70 800 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 HAS3O00219 553 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 HBP1O60381 514 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 F2P00734 622 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 MYOGP15173 224 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 KLRC1P26715 233 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 POLGP54098 1239 aaPredicted RBP9.25□□□□□ -0.93
GPC3-203ENST00000406757 AMPD3Q01432 767 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 PPFIA1Q13136 1202 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 TARBP2Q15633 366 aaKnown RBP9.25□□□□□ -0.93
GPC3-203ENST00000406757 GRIK4Q16099 956 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 FAM47CQ5HY64 1035 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 SMYD4Q8IYR2 804 aaPredicted RBP9.25□□□□□ -0.93
GPC3-203ENST00000406757 METTL13Q8N6R0 699 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 SMARCE1Q969G3 411 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 SYAP1Q96A49 352 aaPredicted RBP9.25□□□□□ -0.93
GPC3-203ENST00000406757 FAM167AQ96KS9 214 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 ASB2Q96Q27 587 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms