RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 PNMA3Q9UL41 463 aa18.52■□□□□ 0.55
KDSR-202ENST00000406396 WDR64B1ANS9 1081 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 GYG2O15488 501 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 HSPA4LO95757 839 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 DCAF4Q8WV16 495 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 AP5M1Q9H0R1 490 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 LDHAP00338 332 aaKnown RBP18.51■□□□□ 0.55
KDSR-202ENST00000406396 ZNF211Q13398 564 aaPredicted RBP18.51■□□□□ 0.55
KDSR-202ENST00000406396 ABI1Q8IZP0 508 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 NLRP4Q96MN2 994 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 CD163L1Q9NR16 1453 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 GMNCA6NCL1 334 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 CHUKO15111 745 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 PPP2R2AP63151 447 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 PPP6R3Q5H9R7 873 aaPredicted RBP18.51■□□□□ 0.55
KDSR-202ENST00000406396 CHMP6Q96FZ7 201 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 PLA2G12BQ9BX93 195 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 NVLO15381 856 aaKnown RBP18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 USP17L6PQ6QN14 398 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 TRIM67Q6ZTA4 783 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 ARMCX2Q7L311 632 aa18.51■□□□□ 0.55
KDSR-202ENST00000406396 EPM2AIP1Q7L775 607 aaPredicted RBP18.51■□□□□ 0.55
KDSR-202ENST00000406396 POTEB3A0JP26 581 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 POTECB2RU33 542 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 FOXN1O15353 648 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 PDCD2Q16342 344 aaPredicted RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 ZNF667Q5HYK9 610 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 POTEBQ6S5H4 581 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 BZW1Q7L1Q6 419 aaKnown RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 RYBPQ8N488 228 aaPredicted RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 MTA3Q9BTC8 594 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 GRID2IPA4D2P6 1211 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 GH2P01242 217 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 OCRLQ01968 901 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
KDSR-202ENST00000406396 UPF3AQ9H1J1 476 aaKnown RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 TMEM60Q9H2L4 133 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 MROH7-TTC4A0A0A0MT08 1334 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 SPAG7O75391 227 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 FOXO4P98177 505 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 NR1H3Q13133 447 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 PASD1Q8IV76 773 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 THNSL1Q8IYQ7 743 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 TMEM35BQ8NCS4 154 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 KIF28PB7ZC32 967 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 LMNAP02545 664 aaKnown RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 PRELPP51888 382 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 CAV1Q03135 178 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 KNOP1Q1ED39 458 aaKnown RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 HP1BP3Q5SSJ5 553 aaPredicted RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 ST13P4Q8IZP2 240 aaPredicted RBP18.5■□□□□ 0.55
KDSR-202ENST00000406396 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.5■□□□□ 0.557e-6■□□□□ 9.4
KDSR-202ENST00000406396 ZNF341Q9BYN7 854 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 MLXIPLQ9NP71 852 aa18.5■□□□□ 0.55
KDSR-202ENST00000406396 PP2D1A8MPX8 630 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 XPAP23025 273 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 JAK3P52333 1124 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.49■□□□□ 0.557e-6■■■■■ 27.5
KDSR-202ENST00000406396 KRT82Q9NSB4 513 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 PADI6Q6TGC4 694 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 APOBEC3FQ8IUX4 373 aaKnown RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 KRT38O76015 456 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 HSPA8P11142 646 aaKnown RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 MARK3P27448 753 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 KLC3Q6P597 504 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 TTC13Q8NBP0 860 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 ALDH8A1Q9H2A2 487 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 TMEM260Q9NX78 707 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 ZC3H18Q86VM9 953 aaKnown RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 C2orf69Q8N8R5 385 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 ZNF564Q8TBZ8 553 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 TTC1Q99614 292 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 C11orf70Q9BRQ4 267 aa18.49■□□□□ 0.55
KDSR-202ENST00000406396 DCP1AQ9NPI6 582 aaPredicted RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
KDSR-202ENST00000406396 CTIFO43310 598 aaKnown RBP18.48■□□□□ 0.55
KDSR-202ENST00000406396 ATP5HO75947 161 aa18.48■□□□□ 0.55
KDSR-202ENST00000406396 ATP1A1P05023 1023 aaKnown RBP18.48■□□□□ 0.55
KDSR-202ENST00000406396 TAF1BQ53T94 588 aaPredicted RBP18.48■□□□□ 0.55
KDSR-202ENST00000406396 SLC44A5Q8NCS7 719 aa18.48■□□□□ 0.55
KDSR-202ENST00000406396 CALR3Q96L12 384 aaKnown RBP18.48■□□□□ 0.55
KDSR-202ENST00000406396 CRAMP1Q96RY5 1269 aa18.48■□□□□ 0.55
KDSR-202ENST00000406396 TTC7AQ9ULT0 858 aaPredicted RBP18.48■□□□□ 0.55
KDSR-202ENST00000406396 MORC2Q9Y6X9 1032 aaPredicted RBP18.48■□□□□ 0.55
KDSR-202ENST00000406396 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
KDSR-202ENST00000406396 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms