RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 GSTA1P08263 222 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 KRT16P08779 473 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 NQO1P15559 274 aaKnown RBP16.8■□□□□ 0.28
ATG4B-205ENST00000404914 KIAA1755Q5JYT7 1200 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-205ENST00000404914 TTC27Q6P3X3 843 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 OTUD6AQ7L8S5 288 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 SLC30A5Q8TAD4 765 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 SLC35C1Q96A29 364 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 HOOK2Q96ED9 719 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 SAMD15Q9P1V8 674 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 A0A0A6YYK5 440 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-205ENST00000404914 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
ATG4B-205ENST00000404914 UPP2O95045 317 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 XRCC5P13010 732 aaKnown RBP16.8■□□□□ 0.28
ATG4B-205ENST00000404914 PTGIRP43119 386 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 SLC12A3P55017 1021 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 ZNF268Q14587 947 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-205ENST00000404914 CNGA2Q16280 664 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 EDRF1Q3B7T1 1238 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 ERICH1Q86X53 443 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 CPNE8Q86YQ8 564 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 KRT35Q92764 455 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 RAB17Q9H0T7 212 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 ECT2Q9H8V3 914 aa16.8■□□□□ 0.28
ATG4B-205ENST00000404914 SNX3O60493 162 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 KRT13P13646 458 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 SLC16A2P36021 539 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 RIPK1Q13546 671 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 SEPT2Q15019 361 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 C16orf86Q6ZW13 317 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 MAEAQ7L5Y9 396 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 RSRC1Q96IZ7 334 aaKnown RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 ARHGEF10LQ9HCE6 1279 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 BCS1LQ9Y276 419 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 TCRBV7S2A1N4TA0A589 114 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 AUHQ13825 339 aaKnown RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 FRMD5Q7Z6J6 570 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 LMBR1Q8WVP7 490 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 THAP2Q9H0W7 228 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 TTC7AQ9ULT0 858 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 PCDHB13Q9Y5F0 798 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 ASTN1O14525 1302 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 PLCG2P16885 1265 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 SATB1Q01826 763 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 MAPK7Q13164 816 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 HYIQ5T013 277 aa16.79■□□□□ 0.28
ATG4B-205ENST00000404914 CRELD2Q6UXH1 353 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 RTFDC1Q9BY42 306 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 DHX36Q9H2U1 1008 aaKnown RBP16.79■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L15C9J2P7 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L13C9JLJ4 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L11C9JVI0 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L18D6R9N7 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L22D6RA61 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L17D6RBQ6 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L19D6RCP7 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L20D6RJB6 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 OAS1P00973 400 aaKnown RBP16.78■□□□□ 0.28
ATG4B-205ENST00000404914 VCAM1P19320 739 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L24Q0WX57 530 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 GIT2Q14161 759 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 LLGL1Q15334 1064 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 KNOP1Q1ED39 458 aaKnown RBP16.78■□□□□ 0.28
ATG4B-205ENST00000404914 LRCH2Q5VUJ6 765 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 USP17L6PQ6QN14 398 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 PRELID2Q8N945 189 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 REEP2Q9BRK0 252 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 JMJD4Q9H9V9 463 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 STK38LQ9Y2H1 464 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 PCDHA3Q9Y5H8 950 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 CCDC169A6NNP5 214 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 ALADP13716 330 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 SLC8A3P57103 927 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 SPDL1Q96EA4 605 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 TRAF3IP3Q9Y228 551 aa16.78■□□□□ 0.28
ATG4B-205ENST00000404914 TCP11X1B4DZS4 312 aa16.77■□□□□ 0.28
ATG4B-205ENST00000404914 BTDP43251 543 aa16.77■□□□□ 0.28
ATG4B-205ENST00000404914 LONRF1Q17RB8 773 aa16.77■□□□□ 0.28
ATG4B-205ENST00000404914 GALNTL6Q49A17 601 aa16.77■□□□□ 0.28
ATG4B-205ENST00000404914 RFFLQ8WZ73 363 aa16.77■□□□□ 0.28
ATG4B-205ENST00000404914 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
ATG4B-205ENST00000404914 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.28
ATG4B-205ENST00000404914 NCANO14594 1321 aa16.77■□□□□ 0.28
ATG4B-205ENST00000404914 SFI1A8K8P3 1242 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 NR3C1P04150 777 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 SLURP2P0DP57 97 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 NPEPPSP55786 919 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 KSR1Q8IVT5 923 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 ANKLE1Q8NAG6 615 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 GPR88Q9GZN0 384 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms